Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RNU6-662P-201ENST00000384253 104 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 EIF4A1P3-201ENST00000411521 244 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 AL451062.2-201ENST00000427515 271 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 AC092573.2-201ENST00000434546 243 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX4Q06945 AC009963.2-201ENST00000453431 138 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 RN7SL812P-201ENST00000493791 279 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 PARP4P3-201ENST00000510265 317 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 GMPSP1-201ENST00000514075 579 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 RNU1-86P-201ENST00000516108 154 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 RNA5SP519-201ENST00000516480 119 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 RNU1-107P-201ENST00000516617 154 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 DEFB108E-201ENST00000524692 240 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 AC005951.2-201ENST00000576282 495 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 RPL7P50-201ENST00000600588 727 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 BDH2P1-201ENST00000602288 736 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 AC006557.5-201ENST00000603126 811 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX4Q06945 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX4Q06945 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX4Q06945 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX4Q06945 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX4Q06945 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX4Q06945 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX4Q06945 AL049555.1-201ENST00000562834 1933 ntBASIC4.66□□□□□ -1.66
SOX4Q06945 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SOX4Q06945 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SOX4Q06945 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SOX4Q06945 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SOX4Q06945 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SOX4Q06945 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.65□□□□□ -1.66
SOX4Q06945 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SOX4Q06945 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX4Q06945 snoU2_19.2-201ENST00000363024 80 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 RNU6-76P-201ENST00000384060 104 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 RNU6-187P-201ENST00000384139 106 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 Y_RNA.458-201ENST00000384240 102 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 SNORA70C-201ENST00000384538 135 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 MIR521-1-201ENST00000384902 87 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX4Q06945 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX4Q06945 EI24P1-201ENST00000416584 867 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX4Q06945 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX4Q06945 AL591473.1-201ENST00000464297 313 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 SUMO2P6-201ENST00000505273 288 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 AC074250.1-201ENST00000511117 192 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX4Q06945 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX4Q06945 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SOX4Q06945 RPL23AP97-201ENST00000568955 471 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SOX4Q06945 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SOX4Q06945 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SOX4Q06945 MFSD8-242ENST00000641690 4199 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 MTND5P9-201ENST00000503854 1755 ntBASIC4.65□□□□□ -1.67
SOX4Q06945 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SOX4Q06945 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SOX4Q06945 MAPK10-304ENST00000641341 3984 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
SOX4Q06945 RLIMP1-201ENST00000339626 1680 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX4Q06945 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX4Q06945 RNU1-14P-201ENST00000362759 152 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 RNA5SP28-201ENST00000363841 119 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 Y_RNA.277-201ENST00000364754 102 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 MIR548I2-201ENST00000408348 149 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 AL592045.1-201ENST00000429867 352 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 OR4C10P-201ENST00000434991 931 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 AC073587.1-201ENST00000447093 876 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 AC022493.1-201ENST00000492984 337 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX4Q06945 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX4Q06945 AC067942.3-201ENST00000512025 362 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 RN7SKP234-201ENST00000517173 224 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
SOX4Q06945 TOMM20P2-201ENST00000540082 421 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 MIR3160-1-201ENST00000577972 85 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 RN7SL600P-201ENST00000581811 299 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 AL591034.3-201ENST00000605511 685 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 BX284668.6-201ENST00000606899 438 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 AC034102.8-201ENST00000615146 484 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 RMST_4.1-201ENST00000616886 107 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 AC127459.3-201ENST00000624328 466 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX4Q06945 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.64□□□□□ -1.67
SOX4Q06945 Z99571.1-201ENST00000636677 394 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SOX4Q06945 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX4Q06945 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX4Q06945 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SOX4Q06945 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SOX4Q06945 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SOX4Q06945 AC008079.2-201ENST00000623543 20396 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 AC000123.3-201ENST00000624029 4975 ntBASIC4.64□□□□□ -1.67
SOX4Q06945 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SOX4Q06945 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SOX4Q06945 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX4Q06945 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms