Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNORD13-201ENST00000459299 104 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 snoU13.15-201ENST00000459407 104 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 RPL32P14-201ENST00000463196 378 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC117522.2-201ENST00000510049 657 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 SNORA31.24-201ENST00000517232 57 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 SUB1P3-201ENST00000564581 315 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC015720.1-201ENST00000565251 277 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC023825.1-201ENST00000566704 1030 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 BPTFP1-201ENST00000579209 492 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC018638.7-201ENST00000605836 1114 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC004067.1-201ENST00000608733 700 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC108479.2-201ENST00000617314 601 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 MTND1P37-201ENST00000636562 264 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 MIR424-201ENST00000362227 98 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 SNORA25B-201ENST00000365507 128 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 MIR95-201ENST00000385072 81 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 CYCSP49-201ENST00000420810 319 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AL160275.3-201ENST00000423876 471 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 MTCO1P53-201ENST00000441633 699 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 SNRPGP13-201ENST00000442212 177 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 RPL22P13-201ENST00000493291 347 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 RNU6-548P-201ENST00000517083 115 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AP000916.1-201ENST00000533869 835 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AC006199.1-201ENST00000548728 219 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 MIR3683-201ENST00000580847 82 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AL158827.2-201ENST00000602494 330 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 MTCYBP22-201ENST00000603788 447 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.09□□□□□ -2.23
HIST1H1AQ02539 AL691447.3-201ENST00000635020 330 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 MIR4275-201ENST00000636486 87 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.09□□□□□ -2.23
HIST1H1AQ02539 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 MIR561-201ENST00000385216 97 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 RNA5SP465-201ENST00000391195 109 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 PSMA6P3-201ENST00000428242 164 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 AC007919.1-201ENST00000429380 217 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 HMGB1P18-201ENST00000438801 619 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 RPL31P58-201ENST00000469001 379 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 AC027807.1-201ENST00000559921 996 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 DUXAP11-201ENST00000603858 526 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 BX322635.1-201ENST00000605804 496 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 AC107905.1-201ENST00000616204 426 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 AP003476.1-201ENST00000623984 516 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 AC007490.1-201ENST00000624321 703 ntBASIC1.08□□□□□ -2.24
HIST1H1AQ02539 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
HIST1H1AQ02539 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HIST1H1AQ02539 U8.1-201ENST00000362843 134 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 MIR1261-201ENST00000408659 82 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 BTF3P8-201ENST00000414577 526 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 PPP1R11P2-201ENST00000423543 382 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 UBE2V1P4-201ENST00000425374 344 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AC093422.3-201ENST00000428506 305 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AC015922.2-201ENST00000435593 184 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AL121601.2-201ENST00000438019 707 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AL161788.1-201ENST00000441805 169 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 NDUFA5P7-201ENST00000452914 242 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AC112492.4-201ENST00000456549 352 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.07□□□□□ -2.24
HIST1H1AQ02539 RNA5SP61-201ENST00000516453 100 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 SNORA48.11-201ENST00000517015 89 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.07□□□□□ -2.24
HIST1H1AQ02539 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AC008127.2-201ENST00000549925 1075 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.07□□□□□ -2.24
HIST1H1AQ02539 MIR3945-201ENST00000581853 98 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AL020997.3-201ENST00000602843 359 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.07□□□□□ -2.24
HIST1H1AQ02539 AC091812.1-201ENST00000432235 1948 ntBASIC1.07□□□□□ -2.24
HIST1H1AQ02539 MIR26B-201ENST00000362251 77 ntBASIC1.06□□□□□ -2.24
HIST1H1AQ02539 RNU6-60P-201ENST00000364792 103 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms