Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.34□□□□□ -2.19
CCL20P78556 AL445685.2-201ENST00000422551 342 ntBASIC1.34□□□□□ -2.19
CCL20P78556 AL160275.3-201ENST00000423876 471 ntBASIC1.34□□□□□ -2.19
CCL20P78556 AL645568.3-201ENST00000433683 316 ntBASIC1.34□□□□□ -2.19
CCL20P78556 COX7BP2-201ENST00000437976 242 ntBASIC1.34□□□□□ -2.19
CCL20P78556 AC003989.2-201ENST00000440224 169 ntBASIC1.34□□□□□ -2.19
CCL20P78556 MTND6P13-201ENST00000443510 523 ntBASIC1.34□□□□□ -2.19
CCL20P78556 RPL31P50-201ENST00000471002 296 ntBASIC1.34□□□□□ -2.19
CCL20P78556 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.34□□□□□ -2.19
CCL20P78556 AC079203.1-201ENST00000487972 404 ntBASIC1.34□□□□□ -2.19
CCL20P78556 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CCL20P78556 RNU6-583P-201ENST00000516012 92 ntBASIC1.34□□□□□ -2.19
CCL20P78556 RNU6-390P-201ENST00000516259 103 ntBASIC1.34□□□□□ -2.19
CCL20P78556 AP005435.4-201ENST00000529514 284 ntBASIC1.34□□□□□ -2.19
CCL20P78556 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CCL20P78556 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.34□□□□□ -2.19
CCL20P78556 CYB5AP5-201ENST00000549779 389 ntBASIC1.34□□□□□ -2.19
CCL20P78556 AC009063.1-201ENST00000563342 702 ntBASIC1.34□□□□□ -2.19
CCL20P78556 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CCL20P78556 AC073544.2-201ENST00000601155 540 ntBASIC1.34□□□□□ -2.19
CCL20P78556 AC009237.15-201ENST00000610252 501 ntBASIC1.34□□□□□ -2.19
CCL20P78556 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.34□□□□□ -2.19
CCL20P78556 AC008759.3-201ENST00000613300 508 ntBASIC1.34□□□□□ -2.19
CCL20P78556 AC109454.4-201ENST00000623411 649 ntBASIC1.34□□□□□ -2.19
CCL20P78556 AC099063.3-201ENST00000642066 185 ntBASIC1.34□□□□□ -2.19
CCL20P78556 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CCL20P78556 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCL20P78556 RNU1-72P-201ENST00000362976 153 ntBASIC1.33□□□□□ -2.2
CCL20P78556 RNU6-1167P-201ENST00000363227 94 ntBASIC1.33□□□□□ -2.2
CCL20P78556 AL079342.2-201ENST00000403367 482 ntBASIC1.33□□□□□ -2.2
CCL20P78556 PTGES3P2-201ENST00000407942 482 ntBASIC1.33□□□□□ -2.2
CCL20P78556 MTND1P21-201ENST00000412991 285 ntBASIC1.33□□□□□ -2.2
CCL20P78556 RPL23AP39-201ENST00000415533 405 ntBASIC1.33□□□□□ -2.2
CCL20P78556 AL158823.1-201ENST00000418441 478 ntBASIC1.33□□□□□ -2.2
CCL20P78556 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.33□□□□□ -2.2
CCL20P78556 AL356320.1-201ENST00000429616 163 ntBASIC1.33□□□□□ -2.2
CCL20P78556 RPL17P35-201ENST00000432217 549 ntBASIC1.33□□□□□ -2.2
CCL20P78556 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.33□□□□□ -2.2
CCL20P78556 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CCL20P78556 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.33□□□□□ -2.2
CCL20P78556 CYP2C59P-201ENST00000457790 269 ntBASIC1.33□□□□□ -2.2
CCL20P78556 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.33□□□□□ -2.2
CCL20P78556 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.33□□□□□ -2.2
CCL20P78556 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.33□□□□□ -2.2
CCL20P78556 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.33□□□□□ -2.2
CCL20P78556 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.33□□□□□ -2.2
CCL20P78556 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CCL20P78556 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.33□□□□□ -2.2
CCL20P78556 LINC00933-203ENST00000559812 219 ntBASIC1.33□□□□□ -2.2
CCL20P78556 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.33□□□□□ -2.2
CCL20P78556 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.33□□□□□ -2.2
CCL20P78556 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.33□□□□□ -2.2
CCL20P78556 AF129408.1-201ENST00000608767 431 ntBASIC1.33□□□□□ -2.2
CCL20P78556 AC009974.1-201ENST00000608881 455 ntBASIC1.33□□□□□ -2.2
CCL20P78556 DUSP12P1-201ENST00000612874 516 ntBASIC1.33□□□□□ -2.2
CCL20P78556 AL773524.1-201ENST00000614065 229 ntBASIC1.33□□□□□ -2.2
CCL20P78556 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCL20P78556 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.32□□□□□ -2.2
CCL20P78556 AL161449.1-201ENST00000414531 1199 ntBASIC1.32□□□□□ -2.2
CCL20P78556 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL20P78556 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.32□□□□□ -2.2
CCL20P78556 AC097463.2-201ENST00000421074 142 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL20P78556 MTCO3P45-201ENST00000443036 613 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AL096829.2-201ENST00000446582 742 ntBASIC1.32□□□□□ -2.2
CCL20P78556 RPL36AP48-201ENST00000485521 314 ntBASIC1.32□□□□□ -2.2
CCL20P78556 RPS15AP36-201ENST00000492022 382 ntBASIC1.32□□□□□ -2.2
CCL20P78556 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCL20P78556 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL20P78556 AC022880.1-201ENST00000534017 973 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
CCL20P78556 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL20P78556 MRPS36P5-201ENST00000551909 298 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL20P78556 LARP7P3-201ENST00000579888 337 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AL353997.4-201ENST00000586196 166 ntBASIC1.32□□□□□ -2.2
CCL20P78556 VN1R87P-201ENST00000596706 487 ntBASIC1.32□□□□□ -2.2
CCL20P78556 BNIP3P23-201ENST00000599655 511 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AC106052.1-201ENST00000608029 497 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.32□□□□□ -2.2
CCL20P78556 AC091953.2-201ENST00000623979 160 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AC006386.2-201ENST00000624491 75 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AC012005.1-201ENST00000624575 75 ntBASIC1.32□□□□□ -2.2
CCL20P78556 AL163152.1-201ENST00000642001 374 ntBASIC1.32□□□□□ -2.2
CCL20P78556 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCL20P78556 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.31□□□□□ -2.2
CCL20P78556 RNU6-223P-201ENST00000362830 107 ntBASIC1.31□□□□□ -2.2
CCL20P78556 U8.3-201ENST00000363321 132 ntBASIC1.31□□□□□ -2.2
CCL20P78556 SNORA80A-201ENST00000363922 136 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.31□□□□□ -2.2
CCL20P78556 RNU6-997P-201ENST00000384725 107 ntBASIC1.31□□□□□ -2.2
CCL20P78556 MIR518A2-201ENST00000384966 87 ntBASIC1.31□□□□□ -2.2
CCL20P78556 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCL20P78556 SNORD56-201ENST00000413522 71 ntBASIC1.31□□□□□ -2.2
CCL20P78556 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.31□□□□□ -2.2
CCL20P78556 AC244636.1-201ENST00000421152 228 ntBASIC1.31□□□□□ -2.2
CCL20P78556 RPL36AP53-201ENST00000432891 316 ntBASIC1.31□□□□□ -2.2
CCL20P78556 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.31□□□□□ -2.2
CCL20P78556 HSPE1P21-201ENST00000438283 308 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms