Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.79□□□□□ -1.96
CX3CL1P78423 AP003465.2-201ENST00000602571 373 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 AC025165.5-201ENST00000602802 578 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 AL138889.2-201ENST00000603883 242 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 DUSP12P1-201ENST00000612874 516 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 AC090517.2-201ENST00000614966 680 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 SNORD39.4-201ENST00000620099 78 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 AC024940.5-201ENST00000622889 474 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 AC034229.5-201ENST00000624258 185 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.79□□□□□ -1.96
CX3CL1P78423 SNORA50A-202ENST00000629536 136 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 U2.21-201ENST00000637295 81 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CX3CL1P78423 AC009093.8-201ENST00000641769 292 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
CX3CL1P78423 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.79□□□□□ -1.96
CX3CL1P78423 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CX3CL1P78423 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.79□□□□□ -1.96
CX3CL1P78423 HSPA8P4-201ENST00000511877 1920 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
CX3CL1P78423 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CX3CL1P78423 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.79□□□□□ -1.96
CX3CL1P78423 AC010680.1-201ENST00000590024 3590 ntBASIC2.79□□□□□ -1.96
CX3CL1P78423 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CX3CL1P78423 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CX3CL1P78423 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CX3CL1P78423 RNU6-552P-201ENST00000362869 119 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 RNU6-778P-201ENST00000363269 103 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 Y_RNA.255-201ENST00000364581 97 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 SNORA62.3-201ENST00000365110 153 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 RNU4-12P-201ENST00000365233 139 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 RNU6-483P-201ENST00000384088 108 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 RNU6-903P-201ENST00000391270 109 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 PTMAP2-201ENST00000397627 327 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 RNU2-29P-201ENST00000410423 189 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 RNU4-46P-201ENST00000410818 138 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.78□□□□□ -1.96
CX3CL1P78423 AC245291.1-201ENST00000419501 328 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.78□□□□□ -1.96
CX3CL1P78423 HMGN2P30-201ENST00000423237 256 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.78□□□□□ -1.96
CX3CL1P78423 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.78□□□□□ -1.96
CX3CL1P78423 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.78□□□□□ -1.96
CX3CL1P78423 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.78□□□□□ -1.96
CX3CL1P78423 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.78□□□□□ -1.96
CX3CL1P78423 AL163973.1-201ENST00000484753 577 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.78□□□□□ -1.96
CX3CL1P78423 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.78□□□□□ -1.96
CX3CL1P78423 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AC009902.1-201ENST00000519351 183 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AP006245.1-201ENST00000522549 120 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.78□□□□□ -1.96
CX3CL1P78423 OR5AQ1P-201ENST00000527596 927 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.78□□□□□ -1.96
CX3CL1P78423 AC026333.2-201ENST00000542164 106 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AL157687.1-201ENST00000554853 619 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 MTND4LP5-201ENST00000605152 292 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AC107294.3-201ENST00000609211 526 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 uc_338.11-201ENST00000619132 160 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AC012442.3-202ENST00000636742 206 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.78□□□□□ -1.96
CX3CL1P78423 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CX3CL1P78423 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CX3CL1P78423 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CX3CL1P78423 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.78□□□□□ -1.96
CX3CL1P78423 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.78□□□□□ -1.96
CX3CL1P78423 AL161912.2-201ENST00000565707 3007 ntBASIC2.78□□□□□ -1.96
CX3CL1P78423 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.78□□□□□ -1.96
CX3CL1P78423 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CX3CL1P78423 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.78□□□□□ -1.96
CX3CL1P78423 ELF2P3-201ENST00000445099 1506 ntBASIC2.78□□□□□ -1.97
CX3CL1P78423 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.77□□□□□ -1.97
CX3CL1P78423 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.77□□□□□ -1.97
CX3CL1P78423 AL354685.2-201ENST00000448218 1447 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CX3CL1P78423 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CX3CL1P78423 MTND4P35-201ENST00000604257 1375 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CX3CL1P78423 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CX3CL1P78423 Y_RNA.33-201ENST00000362591 102 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 RNA5SP383-201ENST00000362934 120 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 RNU6-1090P-201ENST00000364065 94 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 SNORA69-201ENST00000383895 132 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 SNORA75B-201ENST00000384053 137 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 MIR200C-201ENST00000384980 68 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CX3CL1P78423 RNU6-1025P-201ENST00000410629 104 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.77□□□□□ -1.97
CX3CL1P78423 AC093578.1-201ENST00000415219 368 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 RPS3AP44-201ENST00000425466 790 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 SKA2P1-201ENST00000425592 390 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.77□□□□□ -1.97
CX3CL1P78423 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.77□□□□□ -1.97
CX3CL1P78423 AC000111.3-201ENST00000433478 193 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 UBE2V1P8-201ENST00000437166 265 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 AL714022.1-201ENST00000439897 151 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 AL357552.1-201ENST00000445254 415 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 RNU6-261P-201ENST00000459506 102 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 RPL21P41-201ENST00000459863 264 ntBASIC2.77□□□□□ -1.97
CX3CL1P78423 AC021205.2-201ENST00000480069 347 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms