Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AL139039.1-201ENST00000401900 692 ntBASIC4.55□□□□□ -1.68
RTP1P59025 RNA5SP39-201ENST00000411245 120 ntBASIC4.55□□□□□ -1.68
RTP1P59025 Z99755.1-201ENST00000414048 380 ntBASIC4.55□□□□□ -1.68
RTP1P59025 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.55□□□□□ -1.68
RTP1P59025 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.55□□□□□ -1.68
RTP1P59025 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.55□□□□□ -1.68
RTP1P59025 AC234775.1-201ENST00000454247 670 ntBASIC4.55□□□□□ -1.68
RTP1P59025 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.55□□□□□ -1.68
RTP1P59025 U8.18-201ENST00000459285 133 ntBASIC4.55□□□□□ -1.68
RTP1P59025 AC116655.1-201ENST00000508324 901 ntBASIC4.55□□□□□ -1.68
RTP1P59025 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.55□□□□□ -1.68
RTP1P59025 RNA5SP384-201ENST00000516615 116 ntBASIC4.55□□□□□ -1.68
RTP1P59025 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTP1P59025 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.55□□□□□ -1.68
RTP1P59025 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.55□□□□□ -1.68
RTP1P59025 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.55□□□□□ -1.68
RTP1P59025 AL355812.1-201ENST00000603215 216 ntBASIC4.55□□□□□ -1.68
RTP1P59025 AC007998.5-201ENST00000622938 237 ntBASIC4.55□□□□□ -1.68
RTP1P59025 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.55□□□□□ -1.68
RTP1P59025 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTP1P59025 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTP1P59025 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.55□□□□□ -1.68
RTP1P59025 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTP1P59025 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RTP1P59025 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.54□□□□□ -1.68
RTP1P59025 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RTP1P59025 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTP1P59025 RNU6-379P-201ENST00000363813 104 ntBASIC4.54□□□□□ -1.68
RTP1P59025 Y_RNA.389-201ENST00000383924 113 ntBASIC4.54□□□□□ -1.68
RTP1P59025 Y_RNA.428-201ENST00000384078 102 ntBASIC4.54□□□□□ -1.68
RTP1P59025 RNU6-306P-201ENST00000384617 107 ntBASIC4.54□□□□□ -1.68
RTP1P59025 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.54□□□□□ -1.68
RTP1P59025 RN7SKP177-201ENST00000410567 355 ntBASIC4.54□□□□□ -1.68
RTP1P59025 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.54□□□□□ -1.68
RTP1P59025 HMGN2P31-201ENST00000432430 273 ntBASIC4.54□□□□□ -1.68
RTP1P59025 MRPS18BP2-201ENST00000434310 759 ntBASIC4.54□□□□□ -1.68
RTP1P59025 HLA-N-201ENST00000437516 135 ntBASIC4.54□□□□□ -1.68
RTP1P59025 CYCSP43-201ENST00000438233 310 ntBASIC4.54□□□□□ -1.68
RTP1P59025 PRDX3P3-201ENST00000447765 522 ntBASIC4.54□□□□□ -1.68
RTP1P59025 SNORD5.1-201ENST00000458800 75 ntBASIC4.54□□□□□ -1.68
RTP1P59025 SNORA59A-201ENST00000459326 152 ntBASIC4.54□□□□□ -1.68
RTP1P59025 RN7SL585P-201ENST00000470538 280 ntBASIC4.54□□□□□ -1.68
RTP1P59025 AC006517.1-201ENST00000480485 328 ntBASIC4.54□□□□□ -1.68
RTP1P59025 RN7SL323P-201ENST00000494712 295 ntBASIC4.54□□□□□ -1.68
RTP1P59025 AC026801.1-201ENST00000497178 464 ntBASIC4.54□□□□□ -1.68
RTP1P59025 AC022493.2-201ENST00000506122 481 ntBASIC4.54□□□□□ -1.68
RTP1P59025 SCARNA16.2-201ENST00000516520 172 ntBASIC4.54□□□□□ -1.68
RTP1P59025 Y_RNA.689-201ENST00000516589 107 ntBASIC4.54□□□□□ -1.68
RTP1P59025 SNORD116.3-201ENST00000517176 78 ntBASIC4.54□□□□□ -1.68
RTP1P59025 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.54□□□□□ -1.68
RTP1P59025 GNAI2P1-201ENST00000541815 315 ntBASIC4.54□□□□□ -1.68
RTP1P59025 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.54□□□□□ -1.68
RTP1P59025 MIR4512-201ENST00000583257 77 ntBASIC4.54□□□□□ -1.68
RTP1P59025 MIR5684-201ENST00000585074 65 ntBASIC4.54□□□□□ -1.68
RTP1P59025 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RTP1P59025 AC011494.1-201ENST00000596454 237 ntBASIC4.54□□□□□ -1.68
RTP1P59025 AC006254.3-201ENST00000603353 884 ntBASIC4.54□□□□□ -1.68
RTP1P59025 AL034351.1-201ENST00000605288 668 ntBASIC4.54□□□□□ -1.68
RTP1P59025 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.54□□□□□ -1.68
RTP1P59025 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTP1P59025 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RTP1P59025 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTP1P59025 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTP1P59025 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.54□□□□□ -1.68
RTP1P59025 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTP1P59025 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTP1P59025 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTP1P59025 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RTP1P59025 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTP1P59025 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RTP1P59025 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTP1P59025 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.53□□□□□ -1.68
RTP1P59025 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RTP1P59025 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTP1P59025 SNORD62.1-201ENST00000362541 86 ntBASIC4.53□□□□□ -1.68
RTP1P59025 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTP1P59025 Y_RNA.493-201ENST00000384422 102 ntBASIC4.53□□□□□ -1.68
RTP1P59025 Y_RNA.556-201ENST00000384677 113 ntBASIC4.53□□□□□ -1.68
RTP1P59025 MIR513A2-201ENST00000385249 127 ntBASIC4.53□□□□□ -1.68
RTP1P59025 RNU6-821P-201ENST00000390995 107 ntBASIC4.53□□□□□ -1.68
RTP1P59025 RNA5SP104-201ENST00000410989 118 ntBASIC4.53□□□□□ -1.68
RTP1P59025 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.53□□□□□ -1.68
RTP1P59025 AC243428.1-201ENST00000421099 264 ntBASIC4.53□□□□□ -1.68
RTP1P59025 USMG5P1-201ENST00000425964 177 ntBASIC4.53□□□□□ -1.68
RTP1P59025 USP9YP30-201ENST00000430729 455 ntBASIC4.53□□□□□ -1.68
RTP1P59025 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.53□□□□□ -1.68
RTP1P59025 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.53□□□□□ -1.68
RTP1P59025 AC092451.1-201ENST00000480211 153 ntBASIC4.53□□□□□ -1.68
RTP1P59025 RPL7P23-201ENST00000493874 747 ntBASIC4.53□□□□□ -1.68
RTP1P59025 HIGD1AP3-201ENST00000515857 278 ntBASIC4.53□□□□□ -1.68
RTP1P59025 RNU7-143P-201ENST00000516781 65 ntBASIC4.53□□□□□ -1.68
RTP1P59025 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTP1P59025 AC103783.1-201ENST00000520506 373 ntBASIC4.53□□□□□ -1.68
RTP1P59025 AP006587.4-201ENST00000526053 529 ntBASIC4.53□□□□□ -1.68
RTP1P59025 CYCSP27-201ENST00000527643 293 ntBASIC4.53□□□□□ -1.68
RTP1P59025 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.53□□□□□ -1.68
RTP1P59025 CYCSP30-201ENST00000546447 172 ntBASIC4.53□□□□□ -1.68
RTP1P59025 AC026371.1-201ENST00000551867 419 ntBASIC4.53□□□□□ -1.68
RTP1P59025 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.53□□□□□ -1.68
RTP1P59025 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms