Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.29□□□□□ -2.04
PKNOX1P55347 ISCA1P1-201ENST00000426679 387 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AC006946.1-201ENST00000429106 328 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX1P55347 AL445687.1-201ENST00000439946 251 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.29□□□□□ -2.04
PKNOX1P55347 DPPA3P1-201ENST00000448050 469 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX1P55347 FABP5P15-201ENST00000453566 214 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX1P55347 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX1P55347 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.29□□□□□ -2.04
PKNOX1P55347 AC072039.1-201ENST00000477611 581 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 LINC00888-204ENST00000487386 421 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AC105252.1-201ENST00000503089 286 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX1P55347 AC026436.1-201ENST00000510537 270 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.29□□□□□ -2.04
PKNOX1P55347 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX1P55347 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX1P55347 RNA5SP356-201ENST00000515972 94 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 SCARNA17.1-201ENST00000516211 143 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 SCARNA17.2-201ENST00000516334 143 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 RNA5SP165-201ENST00000517142 115 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AP006587.4-201ENST00000526053 529 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.29□□□□□ -2.04
PKNOX1P55347 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.29□□□□□ -2.04
PKNOX1P55347 ELOCP32-201ENST00000548625 324 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.29□□□□□ -2.04
PKNOX1P55347 LARP7P3-201ENST00000579888 337 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.29□□□□□ -2.04
PKNOX1P55347 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.29□□□□□ -2.04
PKNOX1P55347 AC007621.1-201ENST00000604544 437 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AC005000.2-201ENST00000605468 310 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.29□□□□□ -2.04
PKNOX1P55347 AC013562.2-201ENST00000611632 603 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 SCARNA17.4-201ENST00000614296 143 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AL160394.1-201ENST00000624765 724 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
PKNOX1P55347 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PKNOX1P55347 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.28□□□□□ -2.04
PKNOX1P55347 UBE2L2-201ENST00000254302 429 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 RNU6-512P-201ENST00000364438 103 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 RNU1-73P-201ENST00000383971 164 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PKNOX1P55347 RNU6-278P-201ENST00000390945 109 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.28□□□□□ -2.04
PKNOX1P55347 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.28□□□□□ -2.04
PKNOX1P55347 AC233279.1-201ENST00000455300 423 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 RN7SL432P-201ENST00000484057 298 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 AC098591.2-201ENST00000510152 315 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.28□□□□□ -2.04
PKNOX1P55347 RNA5SP24-201ENST00000516478 95 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 IGLV3-17-201ENST00000519099 244 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.28□□□□□ -2.04
PKNOX1P55347 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.28□□□□□ -2.04
PKNOX1P55347 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.28□□□□□ -2.04
PKNOX1P55347 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
PKNOX1P55347 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.28□□□□□ -2.04
PKNOX1P55347 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.28□□□□□ -2.04
PKNOX1P55347 MIR3146-201ENST00000580367 79 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 AC103810.6-201ENST00000606708 136 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 MIR6817-201ENST00000615588 66 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.28□□□□□ -2.04
PKNOX1P55347 AC009159.1-201ENST00000618386 642 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 AC006386.2-201ENST00000624491 75 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 AC012005.1-201ENST00000624575 75 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 AC110491.1-201ENST00000562191 2010 ntBASIC2.28□□□□□ -2.04
PKNOX1P55347 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PKNOX1P55347 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
PKNOX1P55347 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.28□□□□□ -2.05
PKNOX1P55347 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PKNOX1P55347 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.27□□□□□ -2.05
PKNOX1P55347 RNA5SP68-201ENST00000363885 119 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 OR5H15-201ENST00000383696 930 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 RNU6-750P-201ENST00000390946 107 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.27□□□□□ -2.05
PKNOX1P55347 NDUFS5P4-201ENST00000412983 318 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.27□□□□□ -2.05
PKNOX1P55347 AC096649.2-201ENST00000416186 393 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.27□□□□□ -2.05
PKNOX1P55347 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.27□□□□□ -2.05
PKNOX1P55347 RPS27AP14-201ENST00000422868 454 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 XKRYP1-201ENST00000423438 492 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 AL353777.1-201ENST00000425552 326 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.27□□□□□ -2.05
PKNOX1P55347 XKRYP2-201ENST00000432915 492 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.27□□□□□ -2.05
PKNOX1P55347 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.27□□□□□ -2.05
PKNOX1P55347 AL109933.2-201ENST00000452651 260 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 RPS3P1-201ENST00000456781 192 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 snoU13.22-201ENST00000459428 104 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 MRPL42P6-201ENST00000486397 371 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 NDUFB4P2-201ENST00000509515 391 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 AC116347.2-201ENST00000514912 523 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 RNU1-103P-201ENST00000516502 125 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.27□□□□□ -2.05
PKNOX1P55347 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.27□□□□□ -2.05
PKNOX1P55347 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms