Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH6P55285 HMGN2P10-201ENST00000448085 265 ntBASIC2.21□□□□□ -2.06
CDH6P55285 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH6P55285 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH6P55285 snoU109.3-201ENST00000459477 145 ntBASIC2.21□□□□□ -2.06
CDH6P55285 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDH6P55285 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH6P55285 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.21□□□□□ -2.06
CDH6P55285 AC010587.2-201ENST00000511727 448 ntBASIC2.21□□□□□ -2.06
CDH6P55285 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH6P55285 AC118465.1-201ENST00000513820 1271 ntBASIC2.21□□□□□ -2.06
CDH6P55285 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.21□□□□□ -2.06
CDH6P55285 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH6P55285 MIR5002-201ENST00000584713 97 ntBASIC2.21□□□□□ -2.06
CDH6P55285 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.21□□□□□ -2.06
CDH6P55285 AC098826.3-201ENST00000603823 466 ntBASIC2.21□□□□□ -2.06
CDH6P55285 AC007038.2-201ENST00000608095 740 ntBASIC2.21□□□□□ -2.06
CDH6P55285 AL157392.4-201ENST00000609756 345 ntBASIC2.21□□□□□ -2.06
CDH6P55285 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDH6P55285 AC064859.1-201ENST00000624741 174 ntBASIC2.21□□□□□ -2.06
CDH6P55285 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.2□□□□□ -2.06
CDH6P55285 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.2□□□□□ -2.06
CDH6P55285 ADAM3A-203ENST00000461344 2157 ntBASIC2.2□□□□□ -2.06
CDH6P55285 CKAP2P1-201ENST00000555477 2049 ntBASIC2.2□□□□□ -2.06
CDH6P55285 MTND4P9-201ENST00000507819 1346 ntBASIC2.2□□□□□ -2.06
CDH6P55285 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.2□□□□□ -2.06
CDH6P55285 RNU4-68P-201ENST00000364314 141 ntBASIC2.2□□□□□ -2.06
CDH6P55285 MIR218-1-201ENST00000384999 110 ntBASIC2.2□□□□□ -2.06
CDH6P55285 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CDH6P55285 AL359634.1-202ENST00000404721 284 ntBASIC2.2□□□□□ -2.06
CDH6P55285 SNORA11.4-201ENST00000408823 129 ntBASIC2.2□□□□□ -2.06
CDH6P55285 RNA5SP425-201ENST00000410336 112 ntBASIC2.2□□□□□ -2.06
CDH6P55285 AL139413.1-201ENST00000421309 217 ntBASIC2.2□□□□□ -2.06
CDH6P55285 GPM6BP2-201ENST00000432046 144 ntBASIC2.2□□□□□ -2.06
CDH6P55285 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.2□□□□□ -2.06
CDH6P55285 SDR42E1P3-201ENST00000438345 502 ntBASIC2.2□□□□□ -2.06
CDH6P55285 AL591719.1-201ENST00000444669 744 ntBASIC2.2□□□□□ -2.06
CDH6P55285 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.2□□□□□ -2.06
CDH6P55285 GPM6BP1-201ENST00000446387 144 ntBASIC2.2□□□□□ -2.06
CDH6P55285 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.2□□□□□ -2.06
CDH6P55285 MTATP6P7-201ENST00000453315 681 ntBASIC2.2□□□□□ -2.06
CDH6P55285 FCF1P6-201ENST00000456841 595 ntBASIC2.2□□□□□ -2.06
CDH6P55285 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.2□□□□□ -2.06
CDH6P55285 AC080013.2-201ENST00000460866 323 ntBASIC2.2□□□□□ -2.06
CDH6P55285 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
CDH6P55285 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.2□□□□□ -2.06
CDH6P55285 AC021739.1-201ENST00000559631 174 ntBASIC2.2□□□□□ -2.06
CDH6P55285 MIR1273D-201ENST00000577266 86 ntBASIC2.2□□□□□ -2.06
CDH6P55285 MIR4513-201ENST00000581077 86 ntBASIC2.2□□□□□ -2.06
CDH6P55285 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.2□□□□□ -2.06
CDH6P55285 DPPA3P3-201ENST00000603842 430 ntBASIC2.2□□□□□ -2.06
CDH6P55285 AC103710.1-201ENST00000610003 901 ntBASIC2.2□□□□□ -2.06
CDH6P55285 AC009269.6-201ENST00000621778 588 ntBASIC2.2□□□□□ -2.06
CDH6P55285 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDH6P55285 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.2□□□□□ -2.06
CDH6P55285 MIR620-201ENST00000385232 95 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AL021407.1-201ENST00000404531 386 ntBASIC2.19□□□□□ -2.06
CDH6P55285 U3.40-201ENST00000408706 208 ntBASIC2.19□□□□□ -2.06
CDH6P55285 MTND1P23-201ENST00000416931 372 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.19□□□□□ -2.06
CDH6P55285 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.19□□□□□ -2.06
CDH6P55285 AL353729.1-201ENST00000425044 720 ntBASIC2.19□□□□□ -2.06
CDH6P55285 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.19□□□□□ -2.06
CDH6P55285 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.19□□□□□ -2.06
CDH6P55285 AL117351.1-201ENST00000438864 766 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AC005094.1-201ENST00000440420 368 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.19□□□□□ -2.06
CDH6P55285 AL031313.1-201ENST00000448435 256 ntBASIC2.19□□□□□ -2.06
CDH6P55285 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.19□□□□□ -2.06
CDH6P55285 FABP5P15-201ENST00000453566 214 ntBASIC2.19□□□□□ -2.06
CDH6P55285 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.19□□□□□ -2.06
CDH6P55285 AC104090.1-201ENST00000506341 1171 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AC093281.2-201ENST00000510153 597 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AP005902.1-201ENST00000521358 186 ntBASIC2.19□□□□□ -2.06
CDH6P55285 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.19□□□□□ -2.06
CDH6P55285 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.19□□□□□ -2.06
CDH6P55285 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.19□□□□□ -2.06
CDH6P55285 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.19□□□□□ -2.06
CDH6P55285 RPP40P2-201ENST00000603596 712 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AC112220.3-201ENST00000605502 502 ntBASIC2.19□□□□□ -2.06
CDH6P55285 SNORD14A-201ENST00000606526 91 ntBASIC2.19□□□□□ -2.06
CDH6P55285 RNU6-88P-201ENST00000606801 100 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AC069294.1-201ENST00000608397 350 ntBASIC2.19□□□□□ -2.06
CDH6P55285 uc_338.14-201ENST00000613162 166 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AL031601.2-202ENST00000622650 282 ntBASIC2.19□□□□□ -2.06
CDH6P55285 AC099654.9-201ENST00000637055 678 ntBASIC2.19□□□□□ -2.06
CDH6P55285 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.19□□□□□ -2.06
CDH6P55285 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CDH6P55285 RNU6-1242P-201ENST00000391052 103 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AL139397.2-201ENST00000404529 772 ntBASIC2.18□□□□□ -2.06
CDH6P55285 CYCSP48-201ENST00000417124 323 ntBASIC2.18□□□□□ -2.06
CDH6P55285 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.18□□□□□ -2.06
CDH6P55285 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH6P55285 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH6P55285 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH6P55285 ISCA1P1-201ENST00000426679 387 ntBASIC2.18□□□□□ -2.06
CDH6P55285 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH6P55285 AL035407.1-201ENST00000429211 571 ntBASIC2.18□□□□□ -2.06
CDH6P55285 TXNL1P1-201ENST00000429528 554 ntBASIC2.18□□□□□ -2.06
CDH6P55285 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms