Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA2D1P54289 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA2D1P54289 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA2D1P54289 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA2D1P54289 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA2D1P54289 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 RNU6-1078P-201ENST00000364522 103 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 SNORD115-7-201ENST00000365306 82 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 RNU5E-6P-201ENST00000365574 115 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 SNORA24.1-201ENST00000384401 135 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 MIR490-201ENST00000384865 128 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 RNU6-370P-201ENST00000411008 104 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 RNA5SP107-201ENST00000411358 122 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 CYCSP4-201ENST00000429682 331 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC005019.1-201ENST00000436455 431 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 USP9YP7-201ENST00000436723 430 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 RPL32P28-201ENST00000443577 397 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA2D1P54289 USP9YP32-201ENST00000452432 430 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 TRBVA-201ENST00000498804 316 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 RN7SKP83-201ENST00000516512 178 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 AP000889.2-201ENST00000532684 490 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC007458.1-201ENST00000542812 373 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC024220.1-201ENST00000603675 484 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 HMGN2P28-201ENST00000606102 262 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC069200.1-201ENST00000609511 323 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 DUSP12P1-201ENST00000612874 516 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC010205.1-201ENST00000616668 449 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC025034.2-201ENST00000623264 286 ntBASIC3.8□□□□□ -1.8
CACNA2D1P54289 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA2D1P54289 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA2D1P54289 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CACNA2D1P54289 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA2D1P54289 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA2D1P54289 MTND5P16-201ENST00000460269 1703 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA2D1P54289 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 AL391417.1-201ENST00000404100 426 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 RNU2-47P-201ENST00000410649 186 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC074085.1-201ENST00000413598 418 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 CRYBB2P1-203ENST00000415709 538 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC113618.1-201ENST00000416747 285 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 ARL5AP1-201ENST00000418991 388 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AL451062.2-201ENST00000427515 271 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 RPL21P23-201ENST00000446654 460 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC107399.1-201ENST00000451226 265 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 HMGB3P30-201ENST00000457863 606 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 RNU7-152P-201ENST00000458982 64 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 RPL7P43-201ENST00000478876 753 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 Y_RNA.654-201ENST00000497848 106 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC135721.1-201ENST00000497954 479 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC021146.2-201ENST00000504736 556 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC093303.1-201ENST00000514549 295 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 RN7SKP24-201ENST00000515888 284 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 COPS8P3-201ENST00000526024 482 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA2D1P54289 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 AL355836.1-201ENST00000555951 870 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.79□□□□□ -1.8
CACNA2D1P54289 MIR4293-201ENST00000584305 78 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC008739.3-201ENST00000603262 127 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 Z82243.1-201ENST00000609432 473 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA2D1P54289 AL713922.2-201ENST00000619384 716 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 U4.6-201ENST00000621618 127 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC092628.2-201ENST00000622492 339 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 AC244517.12-201ENST00000623581 663 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA2D1P54289 ZNF734P-201ENST00000419494 1534 ntBASIC3.79□□□□□ -1.8
CACNA2D1P54289 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA2D1P54289 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms