Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.72□□□□□ -1.81
COPAP53621 MIR4738-201ENST00000579134 87 ntBASIC3.72□□□□□ -1.81
COPAP53621 AC013553.2-201ENST00000604244 589 ntBASIC3.72□□□□□ -1.81
COPAP53621 AC034102.8-201ENST00000615146 484 ntBASIC3.72□□□□□ -1.81
COPAP53621 MTND5P42-201ENST00000637720 498 ntBASIC3.72□□□□□ -1.81
COPAP53621 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
COPAP53621 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COPAP53621 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.72□□□□□ -1.81
COPAP53621 AC007823.1-201ENST00000569932 1566 ntBASIC3.72□□□□□ -1.81
COPAP53621 AC004972.1-201ENST00000623934 2209 ntBASIC3.71□□□□□ -1.82
COPAP53621 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.71□□□□□ -1.82
COPAP53621 RIOK3P1-201ENST00000418778 1528 ntBASIC3.71□□□□□ -1.82
COPAP53621 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COPAP53621 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COPAP53621 SNORD9-201ENST00000362566 104 ntBASIC3.71□□□□□ -1.82
COPAP53621 RNA5SP72-201ENST00000364442 117 ntBASIC3.71□□□□□ -1.82
COPAP53621 SNORA9-201ENST00000384215 133 ntBASIC3.71□□□□□ -1.82
COPAP53621 MIR184-201ENST00000384962 84 ntBASIC3.71□□□□□ -1.82
COPAP53621 EI24P2-201ENST00000397776 1076 ntBASIC3.71□□□□□ -1.82
COPAP53621 AL136116.1-201ENST00000403591 381 ntBASIC3.71□□□□□ -1.82
COPAP53621 U3.42-201ENST00000408746 214 ntBASIC3.71□□□□□ -1.82
COPAP53621 RNU2-29P-201ENST00000410423 189 ntBASIC3.71□□□□□ -1.82
COPAP53621 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.71□□□□□ -1.82
COPAP53621 AC092809.3-201ENST00000415453 231 ntBASIC3.71□□□□□ -1.82
COPAP53621 BX842559.1-201ENST00000419615 532 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.71□□□□□ -1.82
COPAP53621 AL591212.2-201ENST00000433923 257 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC009237.8-201ENST00000445492 379 ntBASIC3.71□□□□□ -1.82
COPAP53621 MTND5P20-201ENST00000448677 143 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC087588.1-201ENST00000462203 316 ntBASIC3.71□□□□□ -1.82
COPAP53621 RPS20P22-201ENST00000473700 357 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC006483.1-201ENST00000487308 313 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC092436.1-201ENST00000506450 503 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.71□□□□□ -1.82
COPAP53621 RBBP4P6-201ENST00000508098 202 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC074250.1-201ENST00000511117 192 ntBASIC3.71□□□□□ -1.82
COPAP53621 SNORA31.1-201ENST00000515993 133 ntBASIC3.71□□□□□ -1.82
COPAP53621 SNORA31.5-201ENST00000516190 133 ntBASIC3.71□□□□□ -1.82
COPAP53621 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.71□□□□□ -1.82
COPAP53621 RN7SKP219-201ENST00000516825 296 ntBASIC3.71□□□□□ -1.82
COPAP53621 SNORA20.3-201ENST00000516880 132 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.71□□□□□ -1.82
COPAP53621 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.71□□□□□ -1.82
COPAP53621 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.71□□□□□ -1.82
COPAP53621 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.71□□□□□ -1.82
COPAP53621 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.71□□□□□ -1.82
COPAP53621 MIR4703-201ENST00000577728 79 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC015917.1-201ENST00000579654 510 ntBASIC3.71□□□□□ -1.82
COPAP53621 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.71□□□□□ -1.82
COPAP53621 BNIP3P30-201ENST00000601184 574 ntBASIC3.71□□□□□ -1.82
COPAP53621 AL670379.4-201ENST00000605279 254 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC008945.2-201ENST00000606056 604 ntBASIC3.71□□□□□ -1.82
COPAP53621 RMST_8.1-201ENST00000610287 165 ntBASIC3.71□□□□□ -1.82
COPAP53621 RMST_3.1-201ENST00000611651 109 ntBASIC3.71□□□□□ -1.82
COPAP53621 AL359547.2-201ENST00000615810 418 ntBASIC3.71□□□□□ -1.82
COPAP53621 MIR6076-201ENST00000617521 113 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC092794.2-201ENST00000620933 563 ntBASIC3.71□□□□□ -1.82
COPAP53621 AP003122.6-201ENST00000623831 495 ntBASIC3.71□□□□□ -1.82
COPAP53621 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.71□□□□□ -1.82
COPAP53621 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
COPAP53621 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COPAP53621 AL079305.1-201ENST00000623159 3008 ntBASIC3.71□□□□□ -1.82
COPAP53621 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
COPAP53621 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
COPAP53621 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COPAP53621 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
COPAP53621 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COPAP53621 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.7□□□□□ -1.82
COPAP53621 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COPAP53621 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COPAP53621 UBE2L2-201ENST00000254302 429 ntBASIC3.7□□□□□ -1.82
COPAP53621 Y_RNA.160-201ENST00000363677 92 ntBASIC3.7□□□□□ -1.82
COPAP53621 MIR490-201ENST00000384865 128 ntBASIC3.7□□□□□ -1.82
COPAP53621 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
COPAP53621 SAR1AP2-201ENST00000392696 594 ntBASIC3.7□□□□□ -1.82
COPAP53621 AL356776.1-201ENST00000406574 447 ntBASIC3.7□□□□□ -1.82
COPAP53621 FAT1P1-201ENST00000406588 507 ntBASIC3.7□□□□□ -1.82
COPAP53621 RPS12P24-201ENST00000412619 387 ntBASIC3.7□□□□□ -1.82
COPAP53621 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.7□□□□□ -1.82
COPAP53621 CALM2P2-201ENST00000428512 440 ntBASIC3.7□□□□□ -1.82
COPAP53621 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.7□□□□□ -1.82
COPAP53621 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.7□□□□□ -1.82
COPAP53621 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.7□□□□□ -1.82
COPAP53621 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.7□□□□□ -1.82
COPAP53621 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.7□□□□□ -1.82
COPAP53621 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.7□□□□□ -1.82
COPAP53621 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.7□□□□□ -1.82
COPAP53621 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.7□□□□□ -1.82
COPAP53621 EIF4EP3-201ENST00000498782 656 ntBASIC3.7□□□□□ -1.82
COPAP53621 TTC39CP1-201ENST00000512513 755 ntBASIC3.7□□□□□ -1.82
COPAP53621 Y_RNA.702-201ENST00000516843 96 ntBASIC3.7□□□□□ -1.82
COPAP53621 RNA5SP291-201ENST00000517222 105 ntBASIC3.7□□□□□ -1.82
COPAP53621 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.7□□□□□ -1.82
COPAP53621 ATP5F1P5-201ENST00000526403 760 ntBASIC3.7□□□□□ -1.82
COPAP53621 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.7□□□□□ -1.82
COPAP53621 AC007458.1-201ENST00000542812 373 ntBASIC3.7□□□□□ -1.82
COPAP53621 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.7□□□□□ -1.82
COPAP53621 AC008011.1-201ENST00000545989 227 ntBASIC3.7□□□□□ -1.82
COPAP53621 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.7□□□□□ -1.82
COPAP53621 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms