Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MTCYBP35-201ENST00000503630 1137 ntBASIC1.27□□□□□ -2.21
SRP9P49458 AC114801.2-201ENST00000503825 781 ntBASIC1.27□□□□□ -2.21
SRP9P49458 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.27□□□□□ -2.21
SRP9P49458 AC117532.1-201ENST00000514638 323 ntBASIC1.27□□□□□ -2.21
SRP9P49458 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.27□□□□□ -2.21
SRP9P49458 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SRP9P49458 AC022254.1-201ENST00000567857 235 ntBASIC1.27□□□□□ -2.21
SRP9P49458 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.27□□□□□ -2.21
SRP9P49458 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.27□□□□□ -2.21
SRP9P49458 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SRP9P49458 AP003973.1-201ENST00000604639 691 ntBASIC1.27□□□□□ -2.21
SRP9P49458 AC004067.1-201ENST00000608733 700 ntBASIC1.27□□□□□ -2.21
SRP9P49458 AP000238.1-201ENST00000608759 426 ntBASIC1.27□□□□□ -2.21
SRP9P49458 AC096586.1-201ENST00000610267 561 ntBASIC1.27□□□□□ -2.21
SRP9P49458 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SRP9P49458 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SRP9P49458 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SRP9P49458 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SRP9P49458 SNORA40.19-201ENST00000390846 128 ntBASIC1.26□□□□□ -2.21
SRP9P49458 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SRP9P49458 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SRP9P49458 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.26□□□□□ -2.21
SRP9P49458 RPL23AP76-201ENST00000441860 458 ntBASIC1.26□□□□□ -2.21
SRP9P49458 HMGN2P10-201ENST00000448085 265 ntBASIC1.26□□□□□ -2.21
SRP9P49458 AC008379.1-201ENST00000463655 464 ntBASIC1.26□□□□□ -2.21
SRP9P49458 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.26□□□□□ -2.21
SRP9P49458 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.26□□□□□ -2.21
SRP9P49458 SNORA4.4-201ENST00000515921 135 ntBASIC1.26□□□□□ -2.21
SRP9P49458 RNU6-362P-201ENST00000516736 90 ntBASIC1.26□□□□□ -2.21
SRP9P49458 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.26□□□□□ -2.21
SRP9P49458 AP005597.4-201ENST00000526762 229 ntBASIC1.26□□□□□ -2.21
SRP9P49458 AC008127.2-201ENST00000549925 1075 ntBASIC1.26□□□□□ -2.21
SRP9P49458 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.26□□□□□ -2.21
SRP9P49458 AC015720.1-201ENST00000565251 277 ntBASIC1.26□□□□□ -2.21
SRP9P49458 FTX_3.1-201ENST00000610451 147 ntBASIC1.26□□□□□ -2.21
SRP9P49458 AC007490.1-201ENST00000624321 703 ntBASIC1.26□□□□□ -2.21
SRP9P49458 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.26□□□□□ -2.21
SRP9P49458 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.25□□□□□ -2.21
SRP9P49458 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
SRP9P49458 RNU6-251P-201ENST00000363235 104 ntBASIC1.25□□□□□ -2.21
SRP9P49458 RNA5SP99-201ENST00000364020 114 ntBASIC1.25□□□□□ -2.21
SRP9P49458 RNU6-878P-201ENST00000384578 110 ntBASIC1.25□□□□□ -2.21
SRP9P49458 AL109755.1-201ENST00000401791 649 ntBASIC1.25□□□□□ -2.21
SRP9P49458 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SRP9P49458 MIR1323-201ENST00000408090 73 ntBASIC1.25□□□□□ -2.21
SRP9P49458 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.25□□□□□ -2.21
SRP9P49458 AL354695.1-201ENST00000427935 228 ntBASIC1.25□□□□□ -2.21
SRP9P49458 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.25□□□□□ -2.21
SRP9P49458 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.25□□□□□ -2.21
SRP9P49458 TPTE2P1-204ENST00000435256 593 ntBASIC1.25□□□□□ -2.21
SRP9P49458 FABP5P14-201ENST00000437273 393 ntBASIC1.25□□□□□ -2.21
SRP9P49458 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.25□□□□□ -2.21
SRP9P49458 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.25□□□□□ -2.21
SRP9P49458 AC104058.1-201ENST00000448028 297 ntBASIC1.25□□□□□ -2.21
SRP9P49458 MRPS33P3-201ENST00000513456 322 ntBASIC1.25□□□□□ -2.21
SRP9P49458 SNORA44.1-201ENST00000517031 108 ntBASIC1.25□□□□□ -2.21
SRP9P49458 RNA5SP165-201ENST00000517142 115 ntBASIC1.25□□□□□ -2.21
SRP9P49458 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.25□□□□□ -2.21
SRP9P49458 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SRP9P49458 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.25□□□□□ -2.21
SRP9P49458 SULT1C2P1-202ENST00000562418 459 ntBASIC1.25□□□□□ -2.21
SRP9P49458 SUB1P3-201ENST00000564581 315 ntBASIC1.25□□□□□ -2.21
SRP9P49458 AC023824.3-201ENST00000569003 562 ntBASIC1.25□□□□□ -2.21
SRP9P49458 LARP7P2-201ENST00000575306 125 ntBASIC1.25□□□□□ -2.21
SRP9P49458 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.25□□□□□ -2.21
SRP9P49458 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.25□□□□□ -2.21
SRP9P49458 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.25□□□□□ -2.21
SRP9P49458 AC018638.7-201ENST00000605836 1114 ntBASIC1.25□□□□□ -2.21
SRP9P49458 AL121652.1-201ENST00000608851 448 ntBASIC1.25□□□□□ -2.21
SRP9P49458 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.25□□□□□ -2.21
SRP9P49458 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
SRP9P49458 RNU6-457P-201ENST00000363999 107 ntBASIC1.24□□□□□ -2.21
SRP9P49458 RNU6-338P-201ENST00000383888 105 ntBASIC1.24□□□□□ -2.21
SRP9P49458 RNU6-741P-201ENST00000383889 107 ntBASIC1.24□□□□□ -2.21
SRP9P49458 RNA5SP213-201ENST00000391031 106 ntBASIC1.24□□□□□ -2.21
SRP9P49458 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.24□□□□□ -2.21
SRP9P49458 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.24□□□□□ -2.21
SRP9P49458 AC092393.1-201ENST00000439625 742 ntBASIC1.24□□□□□ -2.21
SRP9P49458 AC092170.1-201ENST00000440211 356 ntBASIC1.24□□□□□ -2.21
SRP9P49458 SNRPGP13-201ENST00000442212 177 ntBASIC1.24□□□□□ -2.21
SRP9P49458 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.24□□□□□ -2.21
SRP9P49458 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.24□□□□□ -2.21
SRP9P49458 RNA5SP57-201ENST00000459463 123 ntBASIC1.24□□□□□ -2.21
SRP9P49458 RPS20P22-201ENST00000473700 357 ntBASIC1.24□□□□□ -2.21
SRP9P49458 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SRP9P49458 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
SRP9P49458 RNU1-92P-201ENST00000517017 135 ntBASIC1.24□□□□□ -2.21
SRP9P49458 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.24□□□□□ -2.21
SRP9P49458 HSPA8P13-201ENST00000523715 472 ntBASIC1.24□□□□□ -2.21
SRP9P49458 AC095057.3-201ENST00000567102 1157 ntBASIC1.24□□□□□ -2.21
SRP9P49458 AC024619.4-201ENST00000580924 316 ntBASIC1.24□□□□□ -2.21
SRP9P49458 AL391813.1-201ENST00000603098 260 ntBASIC1.24□□□□□ -2.21
SRP9P49458 AP001485.1-201ENST00000604799 199 ntBASIC1.24□□□□□ -2.21
SRP9P49458 AL512598.1-201ENST00000610158 273 ntBASIC1.24□□□□□ -2.21
SRP9P49458 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SRP9P49458 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SRP9P49458 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.23□□□□□ -2.21
SRP9P49458 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.23□□□□□ -2.21
SRP9P49458 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SRP9P49458 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms