Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AP003467.2-201ENST00000520175 319 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.2□□□□□ -2.06
RFX3P48380 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.2□□□□□ -2.06
RFX3P48380 AP004247.1-201ENST00000531556 1289 ntBASIC2.2□□□□□ -2.06
RFX3P48380 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RFX3P48380 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX3P48380 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.2□□□□□ -2.06
RFX3P48380 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.2□□□□□ -2.06
RFX3P48380 MYL12BP1-201ENST00000569826 507 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC011458.1-201ENST00000604034 617 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC011890.2-201ENST00000613393 294 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX3P48380 AC112204.3-201ENST00000623822 332 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC091965.5-201ENST00000624785 342 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC103706.2-201ENST00000638080 240 ntBASIC2.2□□□□□ -2.06
RFX3P48380 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RFX3P48380 AC007336.1-201ENST00000576365 3828 ntBASIC2.2□□□□□ -2.06
RFX3P48380 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX3P48380 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RFX3P48380 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
RFX3P48380 AL139276.1-201ENST00000311910 1001 ntBASIC2.19□□□□□ -2.06
RFX3P48380 MIR21-201ENST00000362134 72 ntBASIC2.19□□□□□ -2.06
RFX3P48380 RNU6-433P-201ENST00000363216 104 ntBASIC2.19□□□□□ -2.06
RFX3P48380 RNU6-1167P-201ENST00000363227 94 ntBASIC2.19□□□□□ -2.06
RFX3P48380 U3.12-201ENST00000364498 214 ntBASIC2.19□□□□□ -2.06
RFX3P48380 RNU6-769P-201ENST00000384407 104 ntBASIC2.19□□□□□ -2.06
RFX3P48380 MIR218-1-201ENST00000384999 110 ntBASIC2.19□□□□□ -2.06
RFX3P48380 MIR524-201ENST00000385242 87 ntBASIC2.19□□□□□ -2.06
RFX3P48380 RN7SKP284-201ENST00000411002 343 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AF274854.1-201ENST00000413236 615 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX3P48380 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RFX3P48380 AL445669.1-201ENST00000426743 755 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.19□□□□□ -2.06
RFX3P48380 AC011753.1-201ENST00000451001 220 ntBASIC2.19□□□□□ -2.06
RFX3P48380 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RFX3P48380 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
RFX3P48380 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX3P48380 RN7SL636P-201ENST00000497504 294 ntBASIC2.19□□□□□ -2.06
RFX3P48380 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.19□□□□□ -2.06
RFX3P48380 MTND2P32-201ENST00000521584 1038 ntBASIC2.19□□□□□ -2.06
RFX3P48380 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.19□□□□□ -2.06
RFX3P48380 AC007115.1-201ENST00000546853 234 ntBASIC2.19□□□□□ -2.06
RFX3P48380 PRELID2P1-201ENST00000552837 301 ntBASIC2.19□□□□□ -2.06
RFX3P48380 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX3P48380 AC007151.1-201ENST00000572774 483 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AC024619.4-201ENST00000580924 316 ntBASIC2.19□□□□□ -2.06
RFX3P48380 MIR544B-201ENST00000582372 78 ntBASIC2.19□□□□□ -2.06
RFX3P48380 MIR3199-1-201ENST00000582434 88 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
RFX3P48380 AC068790.3-201ENST00000602988 553 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AL391813.1-201ENST00000603098 260 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AC112187.2-201ENST00000604345 283 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AC144521.1-201ENST00000607148 956 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AC024933.1-201ENST00000608472 348 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AC013412.1-201ENST00000610687 192 ntBASIC2.19□□□□□ -2.06
RFX3P48380 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.19□□□□□ -2.06
RFX3P48380 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.19□□□□□ -2.06
RFX3P48380 AC005336.3-201ENST00000623833 2679 ntBASIC2.19□□□□□ -2.06
RFX3P48380 ZNF876P-202ENST00000398732 1485 ntBASIC2.19□□□□□ -2.06
RFX3P48380 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
RFX3P48380 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX3P48380 AC092125.1-201ENST00000562568 1995 ntBASIC2.18□□□□□ -2.06
RFX3P48380 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RFX3P48380 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFX3P48380 RNU6-1083P-201ENST00000384022 107 ntBASIC2.18□□□□□ -2.06
RFX3P48380 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
RFX3P48380 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX3P48380 AC009963.1-201ENST00000417265 157 ntBASIC2.18□□□□□ -2.06
RFX3P48380 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX3P48380 RPS15AP28-201ENST00000435088 386 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AL139109.1-201ENST00000455491 297 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX3P48380 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX3P48380 DYNLL1P5-201ENST00000467158 270 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AC055855.1-201ENST00000489563 579 ntBASIC2.18□□□□□ -2.06
RFX3P48380 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX3P48380 AC091951.3-201ENST00000504093 246 ntBASIC2.18□□□□□ -2.06
RFX3P48380 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX3P48380 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.18□□□□□ -2.06
RFX3P48380 RNA5SP24-201ENST00000516478 95 ntBASIC2.18□□□□□ -2.06
RFX3P48380 RNA5SP82-201ENST00000516707 92 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX3P48380 AC109329.2-201ENST00000519658 482 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RFX3P48380 AGGF1P5-201ENST00000567900 919 ntBASIC2.18□□□□□ -2.06
RFX3P48380 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX3P48380 BNIP3P40-201ENST00000596017 556 ntBASIC2.18□□□□□ -2.06
RFX3P48380 BNIP3P23-201ENST00000599655 511 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AC098826.3-201ENST00000603823 466 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AL161798.1-201ENST00000604630 131 ntBASIC2.18□□□□□ -2.06
RFX3P48380 BCRP9-201ENST00000605312 388 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AC005332.10-201ENST00000612725 619 ntBASIC2.18□□□□□ -2.06
RFX3P48380 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AC012150.2-201ENST00000621300 544 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AC068787.1-201ENST00000623908 691 ntBASIC2.18□□□□□ -2.06
RFX3P48380 AC007490.1-201ENST00000624321 703 ntBASIC2.18□□□□□ -2.06
RFX3P48380 MIR1291-201ENST00000627649 87 ntBASIC2.18□□□□□ -2.06
RFX3P48380 CU459211.1-201ENST00000635667 749 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms