Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC009878.1-201ENST00000621819 340 ntBASIC2.71□□□□□ -1.98
BRCC3P46736 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.71□□□□□ -1.98
BRCC3P46736 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
BRCC3P46736 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
BRCC3P46736 RNY4P24-201ENST00000362735 96 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 RNU6-799P-201ENST00000363567 107 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 RNU4-1-201ENST00000363925 141 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 RNY4P16-201ENST00000364768 94 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 SNORA75-201ENST00000384158 137 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 Y_RNA.553-201ENST00000384670 102 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 SPA17P1-201ENST00000416656 452 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.7□□□□□ -1.98
BRCC3P46736 AC092047.1-201ENST00000424997 240 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 TIMM9P1-201ENST00000436122 256 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 RPL22P17-201ENST00000438729 315 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.7□□□□□ -1.98
BRCC3P46736 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.7□□□□□ -1.98
BRCC3P46736 MTND1P29-201ENST00000448112 647 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.7□□□□□ -1.98
BRCC3P46736 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.7□□□□□ -1.98
BRCC3P46736 RNA5SP269-201ENST00000459032 137 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.7□□□□□ -1.98
BRCC3P46736 AC010424.1-201ENST00000506336 297 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.7□□□□□ -1.98
BRCC3P46736 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BRCC3P46736 AC010486.1-201ENST00000511793 424 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.7□□□□□ -1.98
BRCC3P46736 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.7□□□□□ -1.98
BRCC3P46736 NRON-201ENST00000517270 370 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.7□□□□□ -1.98
BRCC3P46736 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.7□□□□□ -1.98
BRCC3P46736 DNAJC8P1-201ENST00000554535 372 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AC006362.1-201ENST00000567392 174 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 MIR3146-201ENST00000580367 79 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 MIR4293-201ENST00000584305 78 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AC068790.3-201ENST00000602988 553 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 RN7SKP299-201ENST00000606679 301 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AC245517.5-201ENST00000611529 162 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AC091304.9-201ENST00000612091 226 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 TUG1_2.1-201ENST00000614234 87 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
BRCC3P46736 AC009509.4-201ENST00000619202 509 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 AP003399.1-201ENST00000637534 361 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.7□□□□□ -1.98
BRCC3P46736 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
BRCC3P46736 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.7□□□□□ -1.98
BRCC3P46736 AL049641.1-201ENST00000441055 1948 ntBASIC2.7□□□□□ -1.98
BRCC3P46736 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
BRCC3P46736 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.69□□□□□ -1.98
BRCC3P46736 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BRCC3P46736 AC004944.1-201ENST00000517807 3059 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
BRCC3P46736 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
BRCC3P46736 FGF7P2-201ENST00000332473 296 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RNU6-432P-201ENST00000384196 109 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RNU6-348P-201ENST00000384386 107 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RNA5SP252-201ENST00000391131 119 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 Y_RNA.598-201ENST00000410480 95 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BRCC3P46736 BTF3L4P1-201ENST00000413813 468 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RPL7P10-201ENST00000417407 739 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.69□□□□□ -1.98
BRCC3P46736 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCC3P46736 AC092573.2-201ENST00000434546 243 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCC3P46736 CBWD4P-201ENST00000445695 655 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 AC010099.1-201ENST00000455434 375 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RPS20P22-201ENST00000473700 357 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RPL23AP11-201ENST00000475260 469 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RPS27AP9-201ENST00000477681 438 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 AL135752.1-201ENST00000479477 471 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RPL9P33-201ENST00000484311 566 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 MTND1P3-201ENST00000484956 952 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 AL049874.1-201ENST00000489560 388 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCC3P46736 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCC3P46736 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCC3P46736 AC114797.1-201ENST00000514003 728 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RNU2-46P-201ENST00000517038 113 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 RNU6-64P-201ENST00000517119 105 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 AP003122.3-201ENST00000526316 255 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCC3P46736 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCC3P46736 RPL21P5-201ENST00000554662 472 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCC3P46736 U4.3-201ENST00000621047 82 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
BRCC3P46736 AC007785.2-201ENST00000598627 1916 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 OR4G2P-202ENST00000641004 1759 ntBASIC2.69□□□□□ -1.98
BRCC3P46736 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
BRCC3P46736 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.68□□□□□ -1.98
BRCC3P46736 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
BRCC3P46736 VTRNA1-1-201ENST00000363120 99 ntBASIC2.68□□□□□ -1.98
BRCC3P46736 U8.3-201ENST00000363321 132 ntBASIC2.68□□□□□ -1.98
BRCC3P46736 Y_RNA.318-201ENST00000365131 97 ntBASIC2.68□□□□□ -1.98
BRCC3P46736 Y_RNA.359-201ENST00000365498 102 ntBASIC2.68□□□□□ -1.98
BRCC3P46736 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.68□□□□□ -1.98
BRCC3P46736 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.68□□□□□ -1.98
BRCC3P46736 RNU6-741P-201ENST00000383889 107 ntBASIC2.68□□□□□ -1.98
BRCC3P46736 RNU6-1035P-201ENST00000384477 107 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms