Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NKX2-1P43699 RNU6-190P-201ENST00000384154 102 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 MIR30B-201ENST00000384850 88 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 MIR301A-201ENST00000385261 86 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NKX2-1P43699 Z99755.1-201ENST00000414048 380 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 RPL32P35-201ENST00000415214 394 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 USP9YP27-201ENST00000418455 438 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.78□□□□□ -1.96
NKX2-1P43699 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.78□□□□□ -1.96
NKX2-1P43699 SDCBPP3-201ENST00000419629 891 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NKX2-1P43699 HSPD1P21-201ENST00000436541 245 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 RPL7P54-201ENST00000438336 674 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 SEPT14P3-201ENST00000439401 183 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC122718.1-201ENST00000439448 744 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 MTND4P25-201ENST00000441039 533 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.78□□□□□ -1.96
NKX2-1P43699 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AL732372.2-207ENST00000445840 183 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 DPPA3P1-201ENST00000448050 469 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC073415.1-201ENST00000449240 153 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 SEPT14P2-201ENST00000453405 183 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.78□□□□□ -1.96
NKX2-1P43699 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.78□□□□□ -1.96
NKX2-1P43699 snoU13.28-201ENST00000459235 104 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 FAM133DP-201ENST00000464802 691 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC034236.1-201ENST00000469891 373 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 FAM92A1P2-202ENST00000504766 877 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC091885.1-201ENST00000506658 268 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.78□□□□□ -1.96
NKX2-1P43699 SEPT14P4-201ENST00000513445 186 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 RNA5SP217-201ENST00000515959 91 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 RNU6-1281P-201ENST00000516223 105 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 FO082796.1-201ENST00000523795 183 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NKX2-1P43699 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.78□□□□□ -1.96
NKX2-1P43699 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.78□□□□□ -1.96
NKX2-1P43699 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.78□□□□□ -1.96
NKX2-1P43699 MIR4697-201ENST00000582977 78 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC008521.1-201ENST00000587471 187 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC008752.3-201ENST00000588113 712 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.78□□□□□ -1.96
NKX2-1P43699 BNIP3P30-201ENST00000601184 574 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AL133393.1-201ENST00000603277 287 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AL355598.1-201ENST00000604169 202 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC004805.2-201ENST00000605382 482 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 DUSP12P1-201ENST00000612874 516 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC099506.2-201ENST00000623074 221 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 AC025034.2-201ENST00000623264 286 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.78□□□□□ -1.96
NKX2-1P43699 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NKX2-1P43699 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
NKX2-1P43699 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 MAPK10-266ENST00000641066 6555 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
NKX2-1P43699 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NKX2-1P43699 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NKX2-1P43699 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.77□□□□□ -1.97
NKX2-1P43699 Y_RNA.89-201ENST00000363031 102 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 RNU6-996P-201ENST00000365438 107 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 SNORA69-201ENST00000383895 132 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 RNU6-641P-201ENST00000384006 107 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 Y_RNA.453-201ENST00000384223 109 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 Y_RNA.534-201ENST00000384599 112 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 RNU6-780P-201ENST00000391030 104 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 RNU1-101P-201ENST00000391171 127 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 SNORD115-47-201ENST00000391226 86 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 RPL32P23-201ENST00000397237 405 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 RNU2-68P-201ENST00000410878 191 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 NDUFS5P4-201ENST00000412983 318 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX2-1P43699 RPL7P2-201ENST00000427639 268 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 HMGB1P9-201ENST00000429856 646 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 MTND1P2-201ENST00000430604 821 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AC091390.1-201ENST00000433904 331 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AL591212.2-201ENST00000433923 257 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AL596276.1-201ENST00000434465 418 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.77□□□□□ -1.97
NKX2-1P43699 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.77□□□□□ -1.97
NKX2-1P43699 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NKX2-1P43699 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX2-1P43699 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.77□□□□□ -1.97
NKX2-1P43699 RNU7-63P-201ENST00000459054 62 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AL133162.1-201ENST00000463228 453 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 RPS15AP34-201ENST00000487776 387 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 RPL38P4-201ENST00000502376 214 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX2-1P43699 AC117522.3-201ENST00000507974 584 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.77□□□□□ -1.97
NKX2-1P43699 SNORA31.21-201ENST00000517180 77 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.77□□□□□ -1.97
NKX2-1P43699 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.77□□□□□ -1.97
NKX2-1P43699 TRAV37-201ENST00000553906 342 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.77□□□□□ -1.97
NKX2-1P43699 AC092325.1-201ENST00000566449 554 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 MIR4703-201ENST00000577728 79 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 MIR5685-201ENST00000579080 79 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 MIR4424-201ENST00000585257 86 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms