Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.38□□□□□ -1.87
PTPN9P43378 MIR2682-201ENST00000580305 110 ntBASIC3.38□□□□□ -1.87
PTPN9P43378 AC013553.2-201ENST00000604244 589 ntBASIC3.38□□□□□ -1.87
PTPN9P43378 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN9P43378 AC107294.1-201ENST00000609524 467 ntBASIC3.38□□□□□ -1.87
PTPN9P43378 AC012314.7-201ENST00000619693 93 ntBASIC3.38□□□□□ -1.87
PTPN9P43378 FER-210ENST00000628534 558 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN9P43378 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PTPN9P43378 API5P2-201ENST00000397055 1498 ntBASIC3.38□□□□□ -1.87
PTPN9P43378 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN9P43378 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN9P43378 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN9P43378 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN9P43378 MAPK10-362ENST00000641864 4484 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 Y_RNA.255-201ENST00000364581 97 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 Y_RNA.256-201ENST00000364594 104 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 SNORD115-7-201ENST00000365306 82 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 RNU6-996P-201ENST00000365438 107 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN9P43378 Y_RNA.453-201ENST00000384223 109 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AP000567.1-201ENST00000406413 156 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 RNU6-908P-201ENST00000410160 94 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 RNU2-33P-201ENST00000410344 192 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 RNU2-29P-201ENST00000410423 189 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 YPEL5P1-201ENST00000419731 367 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 SNRPEP10-201ENST00000420249 274 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AC091390.3-201ENST00000426478 338 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 TRIAP1P1-201ENST00000427062 225 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AC093106.2-201ENST00000428212 385 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 MRPS10P2-201ENST00000431226 381 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN9P43378 BNIP3P2-201ENST00000441221 577 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN9P43378 AC115115.1-201ENST00000449927 248 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN9P43378 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN9P43378 MTCO3P38-201ENST00000468910 766 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AL163973.1-201ENST00000484753 577 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AC109927.2-201ENST00000506416 303 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.37□□□□□ -1.87
PTPN9P43378 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 RNA5SP503-201ENST00000517047 117 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN9P43378 OR5AL2P-201ENST00000532185 920 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AC092325.1-201ENST00000566449 554 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 DPPA3P3-201ENST00000603842 430 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN9P43378 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AC012409.4-201ENST00000612923 249 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AL359547.2-201ENST00000615810 418 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AC011155.2-201ENST00000623202 216 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN9P43378 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PTPN9P43378 U6.114-201ENST00000636407 96 ntBASIC3.37□□□□□ -1.87
PTPN9P43378 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PTPN9P43378 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN9P43378 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PTPN9P43378 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN9P43378 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.36□□□□□ -1.87
PTPN9P43378 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PTPN9P43378 SNORA62.1-201ENST00000364287 154 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 RNA5SP72-201ENST00000364442 117 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN9P43378 SNORA69-201ENST00000383895 132 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 RNU6-190P-201ENST00000384154 102 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 MIR493-201ENST00000385254 89 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 AL357075.1-201ENST00000404107 726 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 AC080125.1-201ENST00000414888 684 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 AC063979.1-201ENST00000415539 377 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 ELOCP14-201ENST00000428070 331 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 AC005300.1-201ENST00000428401 373 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 AC005326.1-201ENST00000429197 123 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 AL596276.1-201ENST00000434465 418 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 ELOCP7-201ENST00000439968 331 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 PRSS3P4-201ENST00000453323 162 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN9P43378 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 RPS23P3-201ENST00000470993 430 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 RN7SKP219-201ENST00000516825 296 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 Y_RNA.704-201ENST00000516851 102 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 RNA5SP291-201ENST00000517222 105 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN9P43378 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN9P43378 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN9P43378 TRAV37-201ENST00000553906 342 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 TRAV28-201ENST00000557548 323 ntBASIC3.36□□□□□ -1.87
PTPN9P43378 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms