Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 UBE2V1P12-201ENST00000503954 474 ntBASIC2.39□□□□□ -2.03
SSR1P43307 MRPS17P9-201ENST00000511924 393 ntBASIC2.39□□□□□ -2.03
SSR1P43307 MTND5P13-201ENST00000513046 1079 ntBASIC2.39□□□□□ -2.03
SSR1P43307 RNU2-44P-201ENST00000516795 194 ntBASIC2.39□□□□□ -2.03
SSR1P43307 RNA5SP364-201ENST00000516938 78 ntBASIC2.39□□□□□ -2.03
SSR1P43307 HMGN1P28-201ENST00000521340 364 ntBASIC2.39□□□□□ -2.03
SSR1P43307 AC013828.2-201ENST00000532487 235 ntBASIC2.39□□□□□ -2.03
SSR1P43307 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SSR1P43307 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.39□□□□□ -2.03
SSR1P43307 AC078814.3-201ENST00000553036 491 ntBASIC2.39□□□□□ -2.03
SSR1P43307 AL359212.1-201ENST00000556608 614 ntBASIC2.39□□□□□ -2.03
SSR1P43307 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.39□□□□□ -2.03
SSR1P43307 MIR4287-201ENST00000579398 78 ntBASIC2.39□□□□□ -2.03
SSR1P43307 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.39□□□□□ -2.03
SSR1P43307 AC078899.2-201ENST00000595282 212 ntBASIC2.39□□□□□ -2.03
SSR1P43307 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.39□□□□□ -2.03
SSR1P43307 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.39□□□□□ -2.03
SSR1P43307 AC106052.1-201ENST00000608029 497 ntBASIC2.39□□□□□ -2.03
SSR1P43307 AC007038.2-201ENST00000608095 740 ntBASIC2.39□□□□□ -2.03
SSR1P43307 AC013470.4-201ENST00000619978 986 ntBASIC2.39□□□□□ -2.03
SSR1P43307 MIR6766-201ENST00000622641 72 ntBASIC2.39□□□□□ -2.03
SSR1P43307 AC007490.1-201ENST00000624321 703 ntBASIC2.39□□□□□ -2.03
SSR1P43307 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SSR1P43307 AC099786.3-201ENST00000565735 1410 ntBASIC2.39□□□□□ -2.03
SSR1P43307 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SSR1P43307 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSR1P43307 Y_RNA.245-201ENST00000364493 95 ntBASIC2.38□□□□□ -2.03
SSR1P43307 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.38□□□□□ -2.03
SSR1P43307 RNU6-906P-201ENST00000384700 70 ntBASIC2.38□□□□□ -2.03
SSR1P43307 MTND1P21-201ENST00000412991 285 ntBASIC2.38□□□□□ -2.03
SSR1P43307 AC009963.1-201ENST00000417265 157 ntBASIC2.38□□□□□ -2.03
SSR1P43307 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.38□□□□□ -2.03
SSR1P43307 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SSR1P43307 AC020550.1-201ENST00000447385 163 ntBASIC2.38□□□□□ -2.03
SSR1P43307 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.38□□□□□ -2.03
SSR1P43307 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.38□□□□□ -2.03
SSR1P43307 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SSR1P43307 AC093809.1-201ENST00000509155 340 ntBASIC2.38□□□□□ -2.03
SSR1P43307 RNU6-64P-201ENST00000517119 105 ntBASIC2.38□□□□□ -2.03
SSR1P43307 RNU2-19P-201ENST00000517288 84 ntBASIC2.38□□□□□ -2.03
SSR1P43307 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.38□□□□□ -2.03
SSR1P43307 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.38□□□□□ -2.03
SSR1P43307 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.38□□□□□ -2.03
SSR1P43307 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.38□□□□□ -2.03
SSR1P43307 MIR544B-201ENST00000582372 78 ntBASIC2.38□□□□□ -2.03
SSR1P43307 BNIP3P23-201ENST00000599655 511 ntBASIC2.38□□□□□ -2.03
SSR1P43307 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.38□□□□□ -2.03
SSR1P43307 AC097655.1-201ENST00000635075 318 ntBASIC2.38□□□□□ -2.03
SSR1P43307 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.38□□□□□ -2.03
SSR1P43307 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSR1P43307 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSR1P43307 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SSR1P43307 MTND4P16-201ENST00000466108 1367 ntBASIC2.37□□□□□ -2.03
SSR1P43307 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.37□□□□□ -2.03
SSR1P43307 AL355596.1-201ENST00000565399 3996 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AC016717.2-201ENST00000609089 5141 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AC004520.1-201ENST00000608362 1413 ntBASIC2.37□□□□□ -2.03
SSR1P43307 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSR1P43307 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSR1P43307 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SSR1P43307 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.37□□□□□ -2.03
SSR1P43307 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.37□□□□□ -2.03
SSR1P43307 MED14P1-201ENST00000430517 648 ntBASIC2.37□□□□□ -2.03
SSR1P43307 RPL35AP22-201ENST00000436855 335 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AC124916.1-201ENST00000444020 547 ntBASIC2.37□□□□□ -2.03
SSR1P43307 ELOCP30-201ENST00000447108 299 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.37□□□□□ -2.03
SSR1P43307 MTND1P9-201ENST00000453775 944 ntBASIC2.37□□□□□ -2.03
SSR1P43307 USP9YP10-201ENST00000454868 628 ntBASIC2.37□□□□□ -2.03
SSR1P43307 RPL23AP49-201ENST00000492925 468 ntBASIC2.37□□□□□ -2.03
SSR1P43307 HMGB3P17-201ENST00000504195 649 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.37□□□□□ -2.03
SSR1P43307 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
SSR1P43307 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.37□□□□□ -2.03
SSR1P43307 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.37□□□□□ -2.03
SSR1P43307 RNU5F-8P-201ENST00000515941 111 ntBASIC2.37□□□□□ -2.03
SSR1P43307 RNU1-103P-201ENST00000516502 125 ntBASIC2.37□□□□□ -2.03
SSR1P43307 RNA5SP281-201ENST00000516504 135 ntBASIC2.37□□□□□ -2.03
SSR1P43307 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
SSR1P43307 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.37□□□□□ -2.03
SSR1P43307 AC073544.2-201ENST00000601155 540 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AC098826.3-201ENST00000603823 466 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AC112220.3-201ENST00000605502 502 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AL391813.2-201ENST00000609113 322 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AC025034.2-201ENST00000623264 286 ntBASIC2.37□□□□□ -2.03
SSR1P43307 AP000676.3-201ENST00000623299 569 ntBASIC2.37□□□□□ -2.03
SSR1P43307 CTSLP2-204ENST00000629029 392 ntBASIC2.37□□□□□ -2.03
SSR1P43307 MIR4275-201ENST00000636486 87 ntBASIC2.37□□□□□ -2.03
SSR1P43307 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
SSR1P43307 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSR1P43307 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SSR1P43307 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.36□□□□□ -2.03
SSR1P43307 RNU6-1167P-201ENST00000363227 94 ntBASIC2.36□□□□□ -2.03
SSR1P43307 RNU1-91P-201ENST00000364746 163 ntBASIC2.36□□□□□ -2.03
SSR1P43307 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSR1P43307 RNU6-723P-201ENST00000383973 107 ntBASIC2.36□□□□□ -2.03
SSR1P43307 RNU6-750P-201ENST00000390946 107 ntBASIC2.36□□□□□ -2.03
SSR1P43307 MIR888-201ENST00000401186 77 ntBASIC2.36□□□□□ -2.03
SSR1P43307 AL591416.1-201ENST00000404015 867 ntBASIC2.36□□□□□ -2.03
SSR1P43307 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms