Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC119751.7-201ENST00000600494 245 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC019159.1-201ENST00000605094 187 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC022893.3-201ENST00000607665 437 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC005332.10-201ENST00000612725 619 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC048344.4-201ENST00000619744 527 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC002064.3-201ENST00000623448 346 ntBASIC3.17□□□□□ -1.9
HADHAP40939 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.17□□□□□ -1.9
HADHAP40939 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HADHAP40939 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.16□□□□□ -1.9
HADHAP40939 RNU6-778P-201ENST00000363269 103 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RNU6-288P-201ENST00000363690 104 ntBASIC3.16□□□□□ -1.9
HADHAP40939 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.16□□□□□ -1.9
HADHAP40939 RNU1-73P-201ENST00000383971 164 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RNU6-641P-201ENST00000384006 107 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RNU6-348P-201ENST00000384386 107 ntBASIC3.16□□□□□ -1.9
HADHAP40939 Y_RNA.534-201ENST00000384599 112 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RPL5P18-201ENST00000406671 891 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
HADHAP40939 Z92545.1-201ENST00000411782 234 ntBASIC3.16□□□□□ -1.9
HADHAP40939 CDK8P2-201ENST00000415020 547 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AC133104.1-201ENST00000429100 218 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RPL23AP30-201ENST00000432419 501 ntBASIC3.16□□□□□ -1.9
HADHAP40939 Z96811.1-201ENST00000445880 108 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AP000936.2-201ENST00000447151 681 ntBASIC3.16□□□□□ -1.9
HADHAP40939 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.16□□□□□ -1.9
HADHAP40939 AC128713.1-201ENST00000471495 306 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RPS26P21-201ENST00000475397 348 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AC126389.1-201ENST00000477436 290 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RPS29P2-201ENST00000479278 136 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AC004924.1-201ENST00000480160 781 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RPL36AP51-201ENST00000487216 318 ntBASIC3.16□□□□□ -1.9
HADHAP40939 MTCO3P28-201ENST00000513351 515 ntBASIC3.16□□□□□ -1.9
HADHAP40939 RN7SKP43-201ENST00000516173 320 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.16□□□□□ -1.9
HADHAP40939 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.16□□□□□ -1.9
HADHAP40939 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
HADHAP40939 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.16□□□□□ -1.9
HADHAP40939 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.16□□□□□ -1.9
HADHAP40939 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.16□□□□□ -1.9
HADHAP40939 MIR4528-201ENST00000577763 90 ntBASIC3.16□□□□□ -1.9
HADHAP40939 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.16□□□□□ -1.9
HADHAP40939 AC012493.2-201ENST00000595083 291 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AC010620.2-201ENST00000600135 313 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AC005000.2-201ENST00000605468 310 ntBASIC3.16□□□□□ -1.9
HADHAP40939 MIR98-201ENST00000606724 119 ntBASIC3.16□□□□□ -1.9
HADHAP40939 AL139286.2-201ENST00000606838 396 ntBASIC3.16□□□□□ -1.9
HADHAP40939 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HADHAP40939 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.16□□□□□ -1.9
HADHAP40939 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HADHAP40939 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.16□□□□□ -1.9
HADHAP40939 MTND5P17-201ENST00000418405 1603 ntBASIC3.15□□□□□ -1.9
HADHAP40939 OR5J1P-201ENST00000313544 939 ntBASIC3.15□□□□□ -1.91
HADHAP40939 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HADHAP40939 Y_RNA.22-201ENST00000362492 102 ntBASIC3.15□□□□□ -1.91
HADHAP40939 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.15□□□□□ -1.91
HADHAP40939 MIR767-201ENST00000390228 109 ntBASIC3.15□□□□□ -1.91
HADHAP40939 RN7SKP220-201ENST00000410611 288 ntBASIC3.15□□□□□ -1.91
HADHAP40939 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.15□□□□□ -1.91
HADHAP40939 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.15□□□□□ -1.91
HADHAP40939 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.15□□□□□ -1.91
HADHAP40939 AC093106.2-201ENST00000428212 385 ntBASIC3.15□□□□□ -1.91
HADHAP40939 RPL31P35-201ENST00000431058 377 ntBASIC3.15□□□□□ -1.91
HADHAP40939 RPS20P5-201ENST00000434808 360 ntBASIC3.15□□□□□ -1.91
HADHAP40939 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.15□□□□□ -1.91
HADHAP40939 AC098831.1-201ENST00000440661 216 ntBASIC3.15□□□□□ -1.91
HADHAP40939 Z75741.1-201ENST00000446793 314 ntBASIC3.15□□□□□ -1.91
HADHAP40939 AC003071.1-201ENST00000451219 789 ntBASIC3.15□□□□□ -1.91
HADHAP40939 RN7SL863P-201ENST00000462370 296 ntBASIC3.15□□□□□ -1.91
HADHAP40939 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.15□□□□□ -1.91
HADHAP40939 KLF3P2-201ENST00000465138 268 ntBASIC3.15□□□□□ -1.91
HADHAP40939 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.15□□□□□ -1.91
HADHAP40939 AC117522.2-201ENST00000510049 657 ntBASIC3.15□□□□□ -1.91
HADHAP40939 RN7SKP298-201ENST00000515950 94 ntBASIC3.15□□□□□ -1.91
HADHAP40939 SCARNA24.1-201ENST00000516465 137 ntBASIC3.15□□□□□ -1.91
HADHAP40939 RNU6-703P-201ENST00000516946 107 ntBASIC3.15□□□□□ -1.91
HADHAP40939 AP003122.3-201ENST00000526316 255 ntBASIC3.15□□□□□ -1.91
HADHAP40939 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.15□□□□□ -1.91
HADHAP40939 AC084851.1-201ENST00000529105 249 ntBASIC3.15□□□□□ -1.91
HADHAP40939 AC006362.1-201ENST00000567392 174 ntBASIC3.15□□□□□ -1.91
HADHAP40939 AC005498.1-201ENST00000592125 465 ntBASIC3.15□□□□□ -1.91
HADHAP40939 AC008739.2-201ENST00000597006 317 ntBASIC3.15□□□□□ -1.91
HADHAP40939 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.15□□□□□ -1.91
HADHAP40939 AC100793.4-201ENST00000613683 429 ntBASIC3.15□□□□□ -1.91
HADHAP40939 AC009509.4-201ENST00000619202 509 ntBASIC3.15□□□□□ -1.91
HADHAP40939 MIR622-201ENST00000638396 96 ntBASIC3.15□□□□□ -1.91
HADHAP40939 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HADHAP40939 AC110491.1-201ENST00000562191 2010 ntBASIC3.15□□□□□ -1.91
HADHAP40939 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HADHAP40939 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.14□□□□□ -1.91
HADHAP40939 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.14□□□□□ -1.91
HADHAP40939 SNORD15B-201ENST00000384714 146 ntBASIC3.14□□□□□ -1.91
HADHAP40939 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.14□□□□□ -1.91
HADHAP40939 NDUFB4P4-201ENST00000404822 243 ntBASIC3.14□□□□□ -1.91
HADHAP40939 RNA5SP274-201ENST00000410484 108 ntBASIC3.14□□□□□ -1.91
HADHAP40939 RNU6-195P-201ENST00000411352 109 ntBASIC3.14□□□□□ -1.91
HADHAP40939 AC096664.2-201ENST00000411843 406 ntBASIC3.14□□□□□ -1.91
HADHAP40939 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.14□□□□□ -1.91
HADHAP40939 CALM2P2-201ENST00000428512 440 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms