Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCN1P35523 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.72□□□□□ -1.49
CLCN1P35523 RNA5SP319-201ENST00000362768 119 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 RNU1-83P-201ENST00000363426 164 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 RNU6-105P-201ENST00000363909 104 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 Y_RNA.292-201ENST00000364904 97 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 MIR32-201ENST00000384965 70 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 AC009238.2-201ENST00000431026 355 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 AC011742.1-201ENST00000431448 434 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 RPS27P18-201ENST00000431701 247 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.72□□□□□ -1.49
CLCN1P35523 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.72□□□□□ -1.49
CLCN1P35523 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.72□□□□□ -1.49
CLCN1P35523 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCN1P35523 MRPL42P6-201ENST00000486397 371 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 RPL23AP49-201ENST00000492925 468 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 SNORD116-28-201ENST00000516123 91 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 AC022559.1-201ENST00000520905 205 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.72□□□□□ -1.49
CLCN1P35523 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 ATP5J2P6-201ENST00000565203 266 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCN1P35523 AC126915.2-201ENST00000610957 190 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 RMST_6.1-201ENST00000611980 203 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 AC099506.2-201ENST00000623074 221 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 AC021753.1-201ENST00000635724 168 ntBASIC5.72□□□□□ -1.49
CLCN1P35523 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLCN1P35523 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCN1P35523 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCN1P35523 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLCN1P35523 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CLCN1P35523 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCN1P35523 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLCN1P35523 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
CLCN1P35523 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCN1P35523 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN1P35523 RNA5SP335-201ENST00000363817 110 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RNU6-335P-201ENST00000364563 113 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 Y_RNA.286-201ENST00000364813 102 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RNU6-47P-201ENST00000383866 107 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RNU6-318P-201ENST00000384283 103 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 DUTP5-201ENST00000406790 469 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RNU4-30P-201ENST00000410245 143 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RN7SKP293-201ENST00000411389 296 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 EIF4HP2-201ENST00000424380 563 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCN1P35523 GAPDHP25-201ENST00000447061 1001 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RN7SL51P-201ENST00000468230 285 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RPL23AP65-201ENST00000475608 468 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RN7SL466P-201ENST00000497546 295 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 Y_RNA.679-201ENST00000516416 91 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RNA5SP373-201ENST00000517271 95 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCN1P35523 SNORD95-201ENST00000579879 68 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 MZT1P2-201ENST00000604387 248 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 RPL23AP88-201ENST00000605759 454 ntBASIC5.71□□□□□ -1.5
CLCN1P35523 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCN1P35523 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCN1P35523 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCN1P35523 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN1P35523 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN1P35523 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCN1P35523 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN1P35523 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CLCN1P35523 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
CLCN1P35523 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CLCN1P35523 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CLCN1P35523 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN1P35523 Y_RNA.170-201ENST00000363746 110 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 SNORD113-1-201ENST00000365321 69 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN1P35523 RNU6-21P-201ENST00000384710 107 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 Y_RNA.569-201ENST00000384749 103 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 RPS4XP3-201ENST00000398541 413 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 Y_RNA.590-201ENST00000410140 107 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 RAB9AP3-201ENST00000412737 573 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCN1P35523 EIF1P2-201ENST00000428233 350 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN1P35523 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN1P35523 CYCSP32-201ENST00000440548 321 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 RAB9AP1-201ENST00000449393 573 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.7□□□□□ -1.5
CLCN1P35523 AC010326.1-201ENST00000462726 602 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 AC100832.1-201ENST00000471945 383 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.7□□□□□ -1.5
CLCN1P35523 RN7SL629P-201ENST00000489622 285 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.7□□□□□ -1.5
CLCN1P35523 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCN1P35523 MIR8080-201ENST00000622224 89 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 AC241585.2-209ENST00000638217 143 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN1P35523 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN1P35523 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.7□□□□□ -1.5
CLCN1P35523 SAMMSON-226ENST00000642089 1582 ntBASIC5.7□□□□□ -1.5
CLCN1P35523 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN1P35523 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN1P35523 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CLCN1P35523 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms