Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC12P31275 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC12P31275 AC005868.1-201ENST00000536421 331 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXC12P31275 OR8R1P-201ENST00000543943 764 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXC12P31275 CYCSP40-201ENST00000575927 294 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC12P31275 AC004805.2-201ENST00000605382 482 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 AC048347.1-201ENST00000624621 427 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 AC007785.2-201ENST00000598627 1916 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC12P31275 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC12P31275 AL158163.1-201ENST00000603915 1649 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 ZFRP1-201ENST00000457579 2970 ntBASIC4.16□□□□□ -1.74
HOXC12P31275 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXC12P31275 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC12P31275 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
HOXC12P31275 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HOXC12P31275 AC005592.1-201ENST00000566527 1640 ntBASIC4.15□□□□□ -1.74
HOXC12P31275 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC12P31275 RNA5SP447-201ENST00000363749 119 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 RNA5SP515-201ENST00000364570 118 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 RNU6-1317P-201ENST00000364582 104 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 RNU1-115P-201ENST00000365329 160 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 RNU6-827P-201ENST00000365553 106 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 Y_RNA.557-201ENST00000384680 107 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AL513475.1-201ENST00000406602 315 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 MRPS18CP6-201ENST00000423587 223 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AC096644.2-201ENST00000429278 159 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 SNRPEP4-201ENST00000435815 279 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 AC004938.1-201ENST00000438468 308 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 AC099799.1-201ENST00000439809 192 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXC12P31275 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 CEACAMP4-201ENST00000457676 421 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AC010618.1-201ENST00000469924 477 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 FO393415.2-201ENST00000480085 343 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 RPL17P19-201ENST00000489069 552 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC12P31275 AC093840.1-201ENST00000511599 336 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 SNORA70.14-201ENST00000516205 110 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 RNU6-572P-201ENST00000516724 80 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 OR5D17P-201ENST00000531492 978 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXC12P31275 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXC12P31275 AL645944.1-201ENST00000603857 493 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AC018889.1-201ENST00000605372 397 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AC087588.2-201ENST00000617667 426 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC12P31275 AC015914.2-201ENST00000618167 288 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 Z69720.2-201ENST00000624755 279 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 AC119674.1-207ENST00000641355 633 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC12P31275 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC12P31275 AC087190.4-201ENST00000574616 8334 ntBASIC4.15□□□□□ -1.75
HOXC12P31275 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC12P31275 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC12P31275 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
HOXC12P31275 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HOXC12P31275 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC12P31275 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HOXC12P31275 AL590240.1-201ENST00000334118 313 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 Y_RNA.80-201ENST00000362996 102 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 Y_RNA.485-201ENST00000384395 102 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 MIR568-201ENST00000385036 95 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 MIR493-201ENST00000385254 89 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 MIR325-201ENST00000385260 98 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 SNORA40C-201ENST00000391285 128 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC12P31275 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC12P31275 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 RPS15AP10-201ENST00000432472 382 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AL353997.1-201ENST00000432936 108 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC12P31275 AL162591.2-201ENST00000449634 317 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AC079168.2-201ENST00000453977 416 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 ANP32BP2-201ENST00000454525 545 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 RPL23AP24-201ENST00000458203 385 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AC133134.1-201ENST00000466800 359 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 RPL23AP45-201ENST00000476406 468 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 RPL31P13-201ENST00000484151 370 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC12P31275 AC116655.1-201ENST00000508324 901 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AC026402.1-201ENST00000513642 170 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 CBX3P8-201ENST00000532412 525 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 GNAI2P1-201ENST00000541815 315 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC12P31275 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC12P31275 SUB1P3-201ENST00000564581 315 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms