Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 IPO8P1-201ENST00000455509 3109 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNGA1P29973 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNGA1P29973 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNGA1P29973 Y_RNA.157-201ENST00000363638 102 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 MIR199A2-201ENST00000385289 110 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 AL592114.1-201ENST00000403842 483 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.25□□□□□ -1.73
CNGA1P29973 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.25□□□□□ -1.73
CNGA1P29973 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.25□□□□□ -1.73
CNGA1P29973 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 CEACAMP4-201ENST00000457676 421 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 RPS15AP34-201ENST00000487776 387 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 CCDC34P1-201ENST00000507441 517 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 NARSP2-201ENST00000518524 679 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 AC022690.1-201ENST00000526681 550 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.25□□□□□ -1.73
CNGA1P29973 AC106782.4-201ENST00000568264 210 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 MIR548S-201ENST00000581352 82 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.25□□□□□ -1.73
CNGA1P29973 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CNGA1P29973 MIR8058-201ENST00000615737 89 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNGA1P29973 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CNGA1P29973 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CNGA1P29973 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNGA1P29973 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
CNGA1P29973 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CNGA1P29973 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CNGA1P29973 AC007656.2-201ENST00000624902 4547 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.24□□□□□ -1.73
CNGA1P29973 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
CNGA1P29973 AC022336.2-201ENST00000568966 2538 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 RNU4-66P-201ENST00000365199 138 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 RNU6-217P-201ENST00000384164 104 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 MIR301A-201ENST00000385261 86 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 MT-TL1-201ENST00000386347 75 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 AL139039.1-201ENST00000401900 692 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 RN7SKP53-201ENST00000411337 315 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.24□□□□□ -1.73
CNGA1P29973 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.24□□□□□ -1.73
CNGA1P29973 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.24□□□□□ -1.73
CNGA1P29973 ERLEC1P1-201ENST00000433806 578 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 AL353572.1-201ENST00000442490 417 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 AC008264.1-201ENST00000447612 367 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 RPS15AP27-201ENST00000449183 343 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 SCARNA18-201ENST00000459004 134 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 HMGN2P26-201ENST00000463169 339 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 RPS29P2-201ENST00000479278 136 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.24□□□□□ -1.73
CNGA1P29973 AC078814.3-201ENST00000553036 491 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.24□□□□□ -1.73
CNGA1P29973 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CNGA1P29973 RNU6-89P-201ENST00000606519 100 ntBASIC4.24□□□□□ -1.73
CNGA1P29973 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.24□□□□□ -1.73
CNGA1P29973 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.24□□□□□ -1.73
CNGA1P29973 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CNGA1P29973 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CNGA1P29973 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CNGA1P29973 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.24□□□□□ -1.73
CNGA1P29973 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CNGA1P29973 OTUD4P1-201ENST00000237841 3067 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.23□□□□□ -1.73
CNGA1P29973 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNGA1P29973 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNGA1P29973 Y_RNA.303-201ENST00000364998 94 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 SNORA48.2-201ENST00000390926 124 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 AL356776.1-201ENST00000406574 447 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 FAT1P1-201ENST00000406588 507 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 AC012498.1-201ENST00000424037 437 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 AL669831.1-202ENST00000428504 417 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.23□□□□□ -1.73
CNGA1P29973 AC087650.1-201ENST00000431445 468 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 GTF2IP13-201ENST00000438487 386 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.23□□□□□ -1.73
CNGA1P29973 CECR9-201ENST00000453421 199 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.23□□□□□ -1.73
CNGA1P29973 SNORD105B-201ENST00000458770 79 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 RPL21P41-201ENST00000459863 264 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 RN7SL601P-201ENST00000471221 293 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.23□□□□□ -1.73
CNGA1P29973 RPL21P99-201ENST00000480369 423 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.23□□□□□ -1.73
CNGA1P29973 LRRC34P2-201ENST00000514850 553 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.23□□□□□ -1.73
CNGA1P29973 PSMA2P1-201ENST00000526365 646 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CNGA1P29973 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.23□□□□□ -1.73
CNGA1P29973 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.23□□□□□ -1.73
CNGA1P29973 RNU1-30P-201ENST00000606575 163 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 U7.8-201ENST00000619968 63 ntBASIC4.23□□□□□ -1.73
CNGA1P29973 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.23□□□□□ -1.73
CNGA1P29973 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.23□□□□□ -1.73
CNGA1P29973 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CNGA1P29973 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNGA1P29973 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNGA1P29973 AL021368.2-201ENST00000606125 5352 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.22□□□□□ -1.73
CNGA1P29973 RNU6-715P-201ENST00000365204 103 ntBASIC4.22□□□□□ -1.73
CNGA1P29973 SNORA1.3-201ENST00000384676 136 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms