Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A5P29400 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A5P29400 Y_RNA.681-201ENST00000516445 113 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.45□□□□□ -2.18
COL4A5P29400 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A5P29400 OR4R1P-201ENST00000529879 463 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC008127.2-201ENST00000549925 1075 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A5P29400 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A5P29400 AC023824.3-201ENST00000569003 562 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A5P29400 AL355877.2-201ENST00000603670 358 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC243773.3-201ENST00000613270 256 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC090772.4-201ENST00000623599 362 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 MIR4275-201ENST00000636486 87 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A5P29400 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A5P29400 RNU6-492P-201ENST00000363035 104 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 Y_RNA.433-201ENST00000384089 102 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 RNU6-1035P-201ENST00000384477 107 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL4A5P29400 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 USP9YP19-201ENST00000412165 485 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A5P29400 USP9YP13-201ENST00000417797 480 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A5P29400 HSFY3P-201ENST00000444242 1191 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A5P29400 RPL30P5-201ENST00000494923 336 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC093852.1-201ENST00000503587 266 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A5P29400 RNU5A-7P-201ENST00000515979 116 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 RNU6-798P-201ENST00000516912 103 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AC090821.2-201ENST00000523552 176 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 CR383656.8-201ENST00000549046 145 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.45□□□□□ -2.18
COL4A5P29400 AC023824.2-201ENST00000566185 400 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AP000254.1-201ENST00000609934 520 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A5P29400 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A5P29400 AP003399.1-201ENST00000637534 361 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A5P29400 MTCO1P23-201ENST00000415223 1526 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 MTND4P27-201ENST00000450813 1354 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL4A5P29400 SNORD65C-201ENST00000390962 71 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 AC074117.2-201ENST00000417130 397 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.44□□□□□ -2.18
COL4A5P29400 AL353691.1-201ENST00000451332 387 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.44□□□□□ -2.18
COL4A5P29400 AC092757.1-201ENST00000467293 467 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.44□□□□□ -2.18
COL4A5P29400 AC093281.2-201ENST00000510153 597 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.44□□□□□ -2.18
COL4A5P29400 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.44□□□□□ -2.18
COL4A5P29400 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.44□□□□□ -2.18
COL4A5P29400 SULT1C2P1-202ENST00000562418 459 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 MIR5000-201ENST00000577717 103 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 MIR5571-201ENST00000577998 113 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 MIR5694-201ENST00000581190 76 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 AC021749.1-201ENST00000604322 607 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 AC098657.3-201ENST00000620434 263 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.44□□□□□ -2.18
COL4A5P29400 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL4A5P29400 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL4A5P29400 SDAD1P2-201ENST00000441308 2028 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
COL4A5P29400 RNA5SP457-201ENST00000363657 124 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AL133264.1-201ENST00000407157 562 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 RNU2-43P-201ENST00000410306 190 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 FCF1P2-201ENST00000415284 583 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AC098614.2-201ENST00000426040 255 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 IFNA20P-201ENST00000436840 528 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AL714022.1-201ENST00000439897 151 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.43□□□□□ -2.18
COL4A5P29400 AC234775.1-201ENST00000454247 670 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 SNRPFP3-201ENST00000457792 225 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 RNU7-23P-201ENST00000459465 62 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AC116337.2-201ENST00000477662 156 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AC090096.1-201ENST00000489168 390 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.43□□□□□ -2.18
COL4A5P29400 CDC42P4-201ENST00000510507 563 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.43□□□□□ -2.18
COL4A5P29400 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.43□□□□□ -2.18
COL4A5P29400 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.43□□□□□ -2.18
COL4A5P29400 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.43□□□□□ -2.18
COL4A5P29400 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.43□□□□□ -2.18
COL4A5P29400 AP001542.1-201ENST00000591314 200 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.43□□□□□ -2.18
COL4A5P29400 AC040174.2-201ENST00000602701 465 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.43□□□□□ -2.18
COL4A5P29400 AC006213.4-201ENST00000616184 634 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 AC006213.5-201ENST00000619673 288 ntBASIC1.43□□□□□ -2.18
COL4A5P29400 RNU5A-1-201ENST00000362698 116 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 SNORD116-23-201ENST00000384645 92 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 ARF4P4-201ENST00000439608 520 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AL096803.2-201ENST00000450032 677 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 TRGVB-201ENST00000453257 471 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms