Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 NDUFS5P4-201ENST00000412983 318 ntBASIC2.54□□□□□ -2
PTPN6P29350 AL592148.1-201ENST00000413568 445 ntBASIC2.54□□□□□ -2
PTPN6P29350 RAC1P6-201ENST00000423911 575 ntBASIC2.54□□□□□ -2
PTPN6P29350 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.54□□□□□ -2
PTPN6P29350 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.54□□□□□ -2
PTPN6P29350 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.54□□□□□ -2
PTPN6P29350 CACYBPP2-201ENST00000453625 678 ntBASIC2.54□□□□□ -2
PTPN6P29350 SSXP1-201ENST00000453640 473 ntBASIC2.54□□□□□ -2
PTPN6P29350 SNORD97-201ENST00000459187 142 ntBASIC2.54□□□□□ -2
PTPN6P29350 AC008571.1-201ENST00000467232 300 ntBASIC2.54□□□□□ -2
PTPN6P29350 NDUFB4P2-201ENST00000509515 391 ntBASIC2.54□□□□□ -2
PTPN6P29350 SNORA31.3-201ENST00000516029 96 ntBASIC2.54□□□□□ -2
PTPN6P29350 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.54□□□□□ -2
PTPN6P29350 AC025881.1-201ENST00000518851 512 ntBASIC2.54□□□□□ -2
PTPN6P29350 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.54□□□□□ -2
PTPN6P29350 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.54□□□□□ -2
PTPN6P29350 MRPS36P5-201ENST00000551909 298 ntBASIC2.54□□□□□ -2
PTPN6P29350 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.54□□□□□ -2
PTPN6P29350 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.54□□□□□ -2
PTPN6P29350 ZNF519P3-201ENST00000557158 1032 ntBASIC2.54□□□□□ -2
PTPN6P29350 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.54□□□□□ -2
PTPN6P29350 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.54□□□□□ -2
PTPN6P29350 AL670379.6-201ENST00000603753 252 ntBASIC2.54□□□□□ -2
PTPN6P29350 AL670379.11-201ENST00000604059 253 ntBASIC2.54□□□□□ -2
PTPN6P29350 AC008162.1-201ENST00000604718 254 ntBASIC2.54□□□□□ -2
PTPN6P29350 AL670379.1-201ENST00000604752 252 ntBASIC2.54□□□□□ -2
PTPN6P29350 AP000860.1-201ENST00000605250 559 ntBASIC2.54□□□□□ -2
PTPN6P29350 AL670379.5-201ENST00000605253 252 ntBASIC2.54□□□□□ -2
PTPN6P29350 AL670379.12-201ENST00000605291 253 ntBASIC2.54□□□□□ -2
PTPN6P29350 AL670379.8-201ENST00000605353 252 ntBASIC2.54□□□□□ -2
PTPN6P29350 ATP1B3P1-201ENST00000605365 821 ntBASIC2.54□□□□□ -2
PTPN6P29350 AL670379.7-201ENST00000605823 252 ntBASIC2.54□□□□□ -2
PTPN6P29350 MIR7844-201ENST00000616161 122 ntBASIC2.54□□□□□ -2
PTPN6P29350 AC009159.2-201ENST00000617603 606 ntBASIC2.54□□□□□ -2
PTPN6P29350 AC006338.1-201ENST00000618453 749 ntBASIC2.54□□□□□ -2
PTPN6P29350 AC068057.2-201ENST00000624047 895 ntBASIC2.54□□□□□ -2
PTPN6P29350 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.54□□□□□ -2
PTPN6P29350 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
PTPN6P29350 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PTPN6P29350 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.53□□□□□ -2
PTPN6P29350 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.53□□□□□ -2
PTPN6P29350 AC092104.1-201ENST00000497346 1441 ntBASIC2.53□□□□□ -2
PTPN6P29350 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PTPN6P29350 RNU1-73P-201ENST00000383971 164 ntBASIC2.53□□□□□ -2
PTPN6P29350 AL138827.1-201ENST00000402666 306 ntBASIC2.53□□□□□ -2
PTPN6P29350 RPL26P27-201ENST00000414397 437 ntBASIC2.53□□□□□ -2
PTPN6P29350 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.53□□□□□ -2
PTPN6P29350 BPY2DP-201ENST00000422208 265 ntBASIC2.53□□□□□ -2
PTPN6P29350 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.53□□□□□ -2
PTPN6P29350 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.53□□□□□ -2
PTPN6P29350 MTND5P25-201ENST00000430499 799 ntBASIC2.53□□□□□ -2
PTPN6P29350 MTND4P25-201ENST00000441039 533 ntBASIC2.53□□□□□ -2
PTPN6P29350 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
PTPN6P29350 ZNF114P1-201ENST00000453500 292 ntBASIC2.53□□□□□ -2
PTPN6P29350 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.53□□□□□ -2
PTPN6P29350 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.53□□□□□ -2
PTPN6P29350 AC133134.1-201ENST00000466800 359 ntBASIC2.53□□□□□ -2
PTPN6P29350 RN7SL432P-201ENST00000484057 298 ntBASIC2.53□□□□□ -2
PTPN6P29350 RPS27AP10-201ENST00000496103 208 ntBASIC2.53□□□□□ -2
PTPN6P29350 RNU5F-8P-201ENST00000515941 111 ntBASIC2.53□□□□□ -2
PTPN6P29350 RNA5SP356-201ENST00000515972 94 ntBASIC2.53□□□□□ -2
PTPN6P29350 AC107934.1-201ENST00000522215 217 ntBASIC2.53□□□□□ -2
PTPN6P29350 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.53□□□□□ -2
PTPN6P29350 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.53□□□□□ -2
PTPN6P29350 RPS3AP4-201ENST00000555161 764 ntBASIC2.53□□□□□ -2
PTPN6P29350 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
PTPN6P29350 MIR4672-201ENST00000583126 81 ntBASIC2.53□□□□□ -2
PTPN6P29350 AC090616.2-202ENST00000584248 222 ntBASIC2.53□□□□□ -2
PTPN6P29350 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.53□□□□□ -2
PTPN6P29350 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.53□□□□□ -2
PTPN6P29350 AC105129.3-201ENST00000605455 485 ntBASIC2.53□□□□□ -2
PTPN6P29350 AC007619.2-201ENST00000605743 379 ntBASIC2.53□□□□□ -2
PTPN6P29350 DUSP12P1-201ENST00000612874 516 ntBASIC2.53□□□□□ -2
PTPN6P29350 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.53□□□□□ -2
PTPN6P29350 AL589994.2-201ENST00000621124 579 ntBASIC2.53□□□□□ -2
PTPN6P29350 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
PTPN6P29350 AC079416.3-201ENST00000624479 549 ntBASIC2.53□□□□□ -2
PTPN6P29350 AC008993.2-201ENST00000631744 806 ntBASIC2.53□□□□□ -2
PTPN6P29350 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.53□□□□□ -2
PTPN6P29350 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
PTPN6P29350 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.52□□□□□ -2.01
PTPN6P29350 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.52□□□□□ -2.01
PTPN6P29350 RNU6-778P-201ENST00000363269 103 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.52□□□□□ -2.01
PTPN6P29350 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.52□□□□□ -2.01
PTPN6P29350 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.52□□□□□ -2.01
PTPN6P29350 MTND4P20-201ENST00000424125 869 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 AC019097.1-201ENST00000424783 735 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 SKA2P1-201ENST00000425592 390 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 ISCA1P1-201ENST00000426679 387 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.52□□□□□ -2.01
PTPN6P29350 MED14P1-201ENST00000430517 648 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.52□□□□□ -2.01
PTPN6P29350 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.52□□□□□ -2.01
PTPN6P29350 AL590365.1-201ENST00000450788 243 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.52□□□□□ -2.01
PTPN6P29350 FABP5P15-201ENST00000453566 214 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 AC107626.1-201ENST00000471084 183 ntBASIC2.52□□□□□ -2.01
PTPN6P29350 AC004263.1-201ENST00000479327 332 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms