Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC007494.3-201ENST00000624660 743 ntBASIC2.67□□□□□ -1.98
PTPN4P29074 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.67□□□□□ -1.98
PTPN4P29074 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PTPN4P29074 ZNF271P-202ENST00000465539 1970 ntBASIC2.67□□□□□ -1.98
PTPN4P29074 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 AC135776.4-201ENST00000624300 1904 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL137003.2-201ENST00000606924 2538 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PTPN4P29074 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PTPN4P29074 Y_RNA.46-201ENST00000362695 102 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 Y_RNA.245-201ENST00000364493 95 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 SNORA68.1-201ENST00000364537 132 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 SET-203ENST00000372688 801 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 SNORD116-8-201ENST00000384365 95 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 RPS4XP8-201ENST00000402039 771 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PTPN4P29074 AC078974.1-201ENST00000411597 223 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 ELOCP17-201ENST00000414751 326 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 ZNF90P2-204ENST00000419323 1075 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.66□□□□□ -1.98
PTPN4P29074 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.66□□□□□ -1.98
PTPN4P29074 HMGB1P9-201ENST00000429856 646 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 GTF2IP20-201ENST00000431663 360 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 RPS15AP7-201ENST00000439294 405 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.66□□□□□ -1.98
PTPN4P29074 KATNBL1P6-201ENST00000453433 915 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.66□□□□□ -1.98
PTPN4P29074 RPL26P9-201ENST00000457466 433 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 SNORD109B-201ENST00000458961 67 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 SNORD109A-201ENST00000459128 67 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.66□□□□□ -1.98
PTPN4P29074 AC112204.1-201ENST00000502591 103 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PTPN4P29074 AC116347.2-201ENST00000514912 523 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.66□□□□□ -1.98
PTPN4P29074 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.66□□□□□ -1.98
PTPN4P29074 AC079600.2-201ENST00000550076 130 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 NACAP3-201ENST00000552100 481 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.66□□□□□ -1.98
PTPN4P29074 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
PTPN4P29074 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.66□□□□□ -1.98
PTPN4P29074 ROCK1P1-201ENST00000573767 549 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.66□□□□□ -1.98
PTPN4P29074 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.66□□□□□ -1.98
PTPN4P29074 OR1M4P-201ENST00000589199 287 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL670379.6-201ENST00000603753 252 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL670379.11-201ENST00000604059 253 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC136601.2-201ENST00000604356 474 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL022161.1-201ENST00000604390 213 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC008162.1-201ENST00000604718 254 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL670379.1-201ENST00000604752 252 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL670379.5-201ENST00000605253 252 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL670379.12-201ENST00000605291 253 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL670379.8-201ENST00000605353 252 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC121334.2-201ENST00000605387 271 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AL670379.7-201ENST00000605823 252 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC092354.1-201ENST00000606057 376 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC104237.2-201ENST00000612456 443 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 AC093591.3-201ENST00000634516 308 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.66□□□□□ -1.98
PTPN4P29074 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
PTPN4P29074 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PTPN4P29074 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.65□□□□□ -1.99
PTPN4P29074 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PTPN4P29074 RNA5SP126-201ENST00000365092 109 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 RNU6-809P-201ENST00000384461 107 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 MIR196B-201ENST00000384852 84 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AL360182.1-201ENST00000397433 468 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 RPS20P2-201ENST00000402520 389 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AL356057.2-201ENST00000403318 432 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 MTCYBP36-201ENST00000404146 440 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.65□□□□□ -1.99
PTPN4P29074 AL353777.1-201ENST00000425552 326 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 TIMM9P1-201ENST00000436122 256 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 CR769767.1-201ENST00000436337 346 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 RPL22P17-201ENST00000438729 315 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AC118469.1-201ENST00000442943 488 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.65□□□□□ -1.99
PTPN4P29074 SNORD97-201ENST00000459187 142 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 MRPS17P3-201ENST00000465453 385 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 MTND3P7-201ENST00000474435 343 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 BET1P1-201ENST00000482276 359 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 SUMO2P6-201ENST00000505273 288 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AC117522.3-201ENST00000507974 584 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.65□□□□□ -1.99
PTPN4P29074 AC010486.1-201ENST00000511793 424 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 SNORA31.15-201ENST00000516771 132 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 RNA5SP471-201ENST00000516971 106 ntBASIC2.65□□□□□ -1.99
PTPN4P29074 RNU6-64P-201ENST00000517119 105 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms