Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNORD127-201ENST00000458892 86 ntBASIC5.15□□□□□ -1.59
RXRBP28702 S100A11P2-201ENST00000467589 312 ntBASIC5.15□□□□□ -1.59
RXRBP28702 AC104057.1-201ENST00000515547 497 ntBASIC5.15□□□□□ -1.59
RXRBP28702 RNU2-27P-201ENST00000516185 142 ntBASIC5.15□□□□□ -1.59
RXRBP28702 RNU6-64P-201ENST00000517119 105 ntBASIC5.15□□□□□ -1.59
RXRBP28702 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.15□□□□□ -1.59
RXRBP28702 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.15□□□□□ -1.59
RXRBP28702 MIR3128-201ENST00000581957 66 ntBASIC5.15□□□□□ -1.59
RXRBP28702 NF1P5-201ENST00000588287 448 ntBASIC5.15□□□□□ -1.59
RXRBP28702 AC125232.2-201ENST00000592457 143 ntBASIC5.15□□□□□ -1.59
RXRBP28702 AC012443.1-201ENST00000605605 231 ntBASIC5.15□□□□□ -1.59
RXRBP28702 AC103710.2-202ENST00000641454 2853 ntBASIC5.15□□□□□ -1.59
RXRBP28702 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.15□□□□□ -1.59
RXRBP28702 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.15□□□□□ -1.59
RXRBP28702 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RXRBP28702 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
RXRBP28702 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RXRBP28702 AL451142.2-201ENST00000429076 2090 ntBASIC5.14□□□□□ -1.59
RXRBP28702 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RXRBP28702 FTLP6-201ENST00000355274 422 ntBASIC5.14□□□□□ -1.59
RXRBP28702 RNU6-960P-201ENST00000364056 120 ntBASIC5.14□□□□□ -1.59
RXRBP28702 Y_RNA.210-201ENST00000364161 110 ntBASIC5.14□□□□□ -1.59
RXRBP28702 Y_RNA.380-201ENST00000365663 111 ntBASIC5.14□□□□□ -1.59
RXRBP28702 RNU2-23P-201ENST00000410545 195 ntBASIC5.14□□□□□ -1.59
RXRBP28702 HMGN1P24-201ENST00000412282 298 ntBASIC5.14□□□□□ -1.59
RXRBP28702 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.14□□□□□ -1.59
RXRBP28702 PGBD4P6-201ENST00000421501 610 ntBASIC5.14□□□□□ -1.59
RXRBP28702 AC017083.1-201ENST00000428093 483 ntBASIC5.14□□□□□ -1.59
RXRBP28702 AC093106.2-201ENST00000428212 385 ntBASIC5.14□□□□□ -1.59
RXRBP28702 CYCSP4-201ENST00000429682 331 ntBASIC5.14□□□□□ -1.59
RXRBP28702 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.14□□□□□ -1.59
RXRBP28702 OSTCP8-201ENST00000445117 448 ntBASIC5.14□□□□□ -1.59
RXRBP28702 AL353752.1-201ENST00000454946 260 ntBASIC5.14□□□□□ -1.59
RXRBP28702 KC877373.1-201ENST00000479066 408 ntBASIC5.14□□□□□ -1.59
RXRBP28702 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.14□□□□□ -1.59
RXRBP28702 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.14□□□□□ -1.59
RXRBP28702 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.14□□□□□ -1.59
RXRBP28702 TBCAP3-201ENST00000512475 312 ntBASIC5.14□□□□□ -1.59
RXRBP28702 RNU6-685P-201ENST00000517088 95 ntBASIC5.14□□□□□ -1.59
RXRBP28702 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RXRBP28702 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.14□□□□□ -1.59
RXRBP28702 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.14□□□□□ -1.59
RXRBP28702 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.14□□□□□ -1.59
RXRBP28702 AC008521.1-201ENST00000587471 187 ntBASIC5.14□□□□□ -1.59
RXRBP28702 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.14□□□□□ -1.59
RXRBP28702 AL451044.1-201ENST00000604867 238 ntBASIC5.14□□□□□ -1.59
RXRBP28702 HMGB1P50-201ENST00000605814 607 ntBASIC5.14□□□□□ -1.59
RXRBP28702 AL606534.2-204ENST00000635008 178 ntBASIC5.14□□□□□ -1.59
RXRBP28702 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RXRBP28702 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.14□□□□□ -1.59
RXRBP28702 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RXRBP28702 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RXRBP28702 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RXRBP28702 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RXRBP28702 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RXRBP28702 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RXRBP28702 AL365440.1-201ENST00000436135 2167 ntBASIC5.14□□□□□ -1.59
RXRBP28702 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RXRBP28702 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RXRBP28702 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.13□□□□□ -1.59
RXRBP28702 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RXRBP28702 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RXRBP28702 Y_RNA.60-201ENST00000362831 98 ntBASIC5.13□□□□□ -1.59
RXRBP28702 Y_RNA.222-201ENST00000364264 102 ntBASIC5.13□□□□□ -1.59
RXRBP28702 RNU6-95P-201ENST00000384697 107 ntBASIC5.13□□□□□ -1.59
RXRBP28702 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RXRBP28702 SNORA16.2-201ENST00000390991 127 ntBASIC5.13□□□□□ -1.59
RXRBP28702 AL583834.1-201ENST00000406943 343 ntBASIC5.13□□□□□ -1.59
RXRBP28702 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.13□□□□□ -1.59
RXRBP28702 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.13□□□□□ -1.59
RXRBP28702 RBMY1KP-201ENST00000423480 476 ntBASIC5.13□□□□□ -1.59
RXRBP28702 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.13□□□□□ -1.59
RXRBP28702 AC105402.2-201ENST00000438503 358 ntBASIC5.13□□□□□ -1.59
RXRBP28702 AC005094.1-201ENST00000440420 368 ntBASIC5.13□□□□□ -1.59
RXRBP28702 HMGB3P30-201ENST00000457863 606 ntBASIC5.13□□□□□ -1.59
RXRBP28702 AC117503.1-201ENST00000472241 394 ntBASIC5.13□□□□□ -1.59
RXRBP28702 RPL21P13-201ENST00000488305 481 ntBASIC5.13□□□□□ -1.59
RXRBP28702 RPL30P11-201ENST00000495304 339 ntBASIC5.13□□□□□ -1.59
RXRBP28702 RBBP4P6-201ENST00000508098 202 ntBASIC5.13□□□□□ -1.59
RXRBP28702 RNU7-143P-201ENST00000516781 65 ntBASIC5.13□□□□□ -1.59
RXRBP28702 AC022616.4-201ENST00000522985 181 ntBASIC5.13□□□□□ -1.59
RXRBP28702 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RXRBP28702 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RXRBP28702 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.13□□□□□ -1.59
RXRBP28702 MIR4504-201ENST00000577413 92 ntBASIC5.13□□□□□ -1.59
RXRBP28702 AC011494.1-201ENST00000596454 237 ntBASIC5.13□□□□□ -1.59
RXRBP28702 AC006023.1-201ENST00000603944 259 ntBASIC5.13□□□□□ -1.59
RXRBP28702 RNU1-30P-201ENST00000606575 163 ntBASIC5.13□□□□□ -1.59
RXRBP28702 MIR7112-201ENST00000616126 65 ntBASIC5.13□□□□□ -1.59
RXRBP28702 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RXRBP28702 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RXRBP28702 AC010615.1-201ENST00000594254 1764 ntBASIC5.13□□□□□ -1.59
RXRBP28702 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RXRBP28702 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
RXRBP28702 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RXRBP28702 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RXRBP28702 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RXRBP28702 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.12□□□□□ -1.59
RXRBP28702 Y_RNA.117-201ENST00000363294 101 ntBASIC5.12□□□□□ -1.59
RXRBP28702 RNU6-178P-201ENST00000384631 104 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms