Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 Y_RNA.804-201ENST00000615262 101 ntBASIC4□□□□□ -1.77
SMARCA1P28370 AC063943.3-201ENST00000615562 356 ntBASIC4□□□□□ -1.77
SMARCA1P28370 AL355365.1-201ENST00000616480 294 ntBASIC4□□□□□ -1.77
SMARCA1P28370 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SMARCA1P28370 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SMARCA1P28370 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SMARCA1P28370 AC093908.1-201ENST00000623125 8092 ntBASIC4□□□□□ -1.77
SMARCA1P28370 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SMARCA1P28370 AC032011.1-201ENST00000611703 1549 ntBASIC4□□□□□ -1.77
SMARCA1P28370 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMARCA1P28370 AC002546.1-201ENST00000588041 2504 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AC006504.1-201ENST00000562493 3666 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.99□□□□□ -1.77
SMARCA1P28370 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMARCA1P28370 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SMARCA1P28370 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.99□□□□□ -1.77
SMARCA1P28370 RNU4-35P-201ENST00000362588 141 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 Y_RNA.72-201ENST00000362894 103 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SMARCA1P28370 MIR591-201ENST00000385290 95 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AL139397.2-201ENST00000404529 772 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 Y_RNA.615-201ENST00000410769 117 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 RNU6-1148P-201ENST00000410992 104 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 RPL30P2-201ENST00000414021 291 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.99□□□□□ -1.77
SMARCA1P28370 AC012498.1-201ENST00000424037 437 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 RPL7P46-201ENST00000425129 740 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AL513185.2-201ENST00000425543 193 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 ZNF863P-201ENST00000426746 417 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 YME1L1P1-201ENST00000429435 297 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 RPS29P31-201ENST00000446147 164 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 ELOCP23-201ENST00000452014 332 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.99□□□□□ -1.77
SMARCA1P28370 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SMARCA1P28370 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.99□□□□□ -1.77
SMARCA1P28370 AC117522.3-201ENST00000507974 584 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AL359273.1-201ENST00000510918 627 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 SNORA70.19-201ENST00000516717 90 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 RNU6-685P-201ENST00000517088 95 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.99□□□□□ -1.77
SMARCA1P28370 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.99□□□□□ -1.77
SMARCA1P28370 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.99□□□□□ -1.77
SMARCA1P28370 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.99□□□□□ -1.77
SMARCA1P28370 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.99□□□□□ -1.77
SMARCA1P28370 RPL23AP84-201ENST00000571193 464 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.99□□□□□ -1.77
SMARCA1P28370 AC024220.1-201ENST00000603675 484 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AC106900.2-201ENST00000604994 317 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 RNU6-89P-201ENST00000606519 100 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.99□□□□□ -1.77
SMARCA1P28370 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SMARCA1P28370 MIR7975-201ENST00000619350 68 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AC104985.2-201ENST00000620598 500 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 AC090617.10-201ENST00000624308 134 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 U6.105-201ENST00000637379 88 ntBASIC3.99□□□□□ -1.77
SMARCA1P28370 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SMARCA1P28370 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SMARCA1P28370 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMARCA1P28370 RNU5A-1-201ENST00000362698 116 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 RNU6-1287P-201ENST00000362914 107 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 RNA5SP50-201ENST00000363731 107 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 RNU1-33P-201ENST00000364249 162 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 Y_RNA.231-201ENST00000364358 102 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 RNU6-1060P-201ENST00000384664 107 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 RNU6-550P-201ENST00000391057 101 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AL162578.1-201ENST00000406202 378 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AL606923.1-201ENST00000406616 190 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AC092809.3-201ENST00000415453 231 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 YPEL5P1-201ENST00000419731 367 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AL451054.2-201ENST00000420896 202 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.98□□□□□ -1.77
SMARCA1P28370 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.98□□□□□ -1.77
SMARCA1P28370 AC005019.1-201ENST00000436455 431 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.98□□□□□ -1.77
SMARCA1P28370 PRDX3P3-201ENST00000447765 522 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.98□□□□□ -1.77
SMARCA1P28370 FABP5P13-201ENST00000452144 328 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 HMGN2P26-201ENST00000463169 339 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.98□□□□□ -1.77
SMARCA1P28370 AL049874.1-201ENST00000489560 388 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AC093663.1-201ENST00000497190 394 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 MTCO3P9-201ENST00000506989 781 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 FCF1P8-201ENST00000510322 597 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 LRRC34P2-201ENST00000514850 553 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 RNU6-123P-201ENST00000516163 102 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 SNORA70.16-201ENST00000516390 95 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 Y_RNA.689-201ENST00000516589 107 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.98□□□□□ -1.77
SMARCA1P28370 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.98□□□□□ -1.77
SMARCA1P28370 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.98□□□□□ -1.77
SMARCA1P28370 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.98□□□□□ -1.77
SMARCA1P28370 AC078814.3-201ENST00000553036 491 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AL355836.1-201ENST00000555951 870 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 MIR5583-1-201ENST00000580941 59 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AC011712.1-201ENST00000588959 234 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AC104763.2-201ENST00000604179 382 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AC069234.5-201ENST00000611056 416 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 AC012409.4-201ENST00000612923 249 ntBASIC3.98□□□□□ -1.77
SMARCA1P28370 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms