Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP24386 DBIP2-201ENST00000419076 262 ntBASIC3.16□□□□□ -1.9
CHMP24386 AL160275.3-201ENST00000423876 471 ntBASIC3.16□□□□□ -1.9
CHMP24386 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.16□□□□□ -1.9
CHMP24386 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.16□□□□□ -1.9
CHMP24386 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP24386 AC005019.1-201ENST00000436455 431 ntBASIC3.16□□□□□ -1.9
CHMP24386 BRK1P2-201ENST00000442875 223 ntBASIC3.16□□□□□ -1.9
CHMP24386 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP24386 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP24386 MTCO2P18-201ENST00000457151 658 ntBASIC3.16□□□□□ -1.9
CHMP24386 RPL23AP67-201ENST00000465341 474 ntBASIC3.16□□□□□ -1.9
CHMP24386 RPS3AP17-201ENST00000472594 777 ntBASIC3.16□□□□□ -1.9
CHMP24386 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.16□□□□□ -1.9
CHMP24386 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP24386 SNORA31.19-201ENST00000517079 126 ntBASIC3.16□□□□□ -1.9
CHMP24386 OR4R1P-201ENST00000529879 463 ntBASIC3.16□□□□□ -1.9
CHMP24386 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.16□□□□□ -1.9
CHMP24386 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.16□□□□□ -1.9
CHMP24386 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.16□□□□□ -1.9
CHMP24386 AC010546.1-201ENST00000569391 485 ntBASIC3.16□□□□□ -1.9
CHMP24386 MIR4782-201ENST00000577987 79 ntBASIC3.16□□□□□ -1.9
CHMP24386 MIR1273C-201ENST00000578669 77 ntBASIC3.16□□□□□ -1.9
CHMP24386 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CHMP24386 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP24386 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.16□□□□□ -1.9
CHMP24386 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.16□□□□□ -1.9
CHMP24386 AC008521.1-201ENST00000587471 187 ntBASIC3.16□□□□□ -1.9
CHMP24386 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP24386 AC020895.1-201ENST00000595362 272 ntBASIC3.16□□□□□ -1.9
CHMP24386 DEFB131E-202ENST00000602581 683 ntBASIC3.16□□□□□ -1.9
CHMP24386 AC006557.5-201ENST00000603126 811 ntBASIC3.16□□□□□ -1.9
CHMP24386 AC007938.3-201ENST00000604965 623 ntBASIC3.16□□□□□ -1.9
CHMP24386 AC093783.1-201ENST00000612976 329 ntBASIC3.16□□□□□ -1.9
CHMP24386 U4.6-201ENST00000621618 127 ntBASIC3.16□□□□□ -1.9
CHMP24386 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
CHMP24386 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.16□□□□□ -1.9
CHMP24386 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHMP24386 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHMP24386 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHMP24386 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHMP24386 RNU6-395P-201ENST00000365662 106 ntBASIC3.15□□□□□ -1.91
CHMP24386 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CHMP24386 RNU6-1042P-201ENST00000384204 107 ntBASIC3.15□□□□□ -1.91
CHMP24386 RPL5P18-201ENST00000406671 891 ntBASIC3.15□□□□□ -1.91
CHMP24386 RNU6-387P-201ENST00000411331 105 ntBASIC3.15□□□□□ -1.91
CHMP24386 AL663109.1-201ENST00000411498 844 ntBASIC3.15□□□□□ -1.91
CHMP24386 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.15□□□□□ -1.91
CHMP24386 AL356968.1-201ENST00000416622 474 ntBASIC3.15□□□□□ -1.91
CHMP24386 AL358075.3-201ENST00000426289 226 ntBASIC3.15□□□□□ -1.91
CHMP24386 SAR1AP4-201ENST00000429225 591 ntBASIC3.15□□□□□ -1.91
CHMP24386 MTCO2P11-201ENST00000431069 680 ntBASIC3.15□□□□□ -1.91
CHMP24386 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.15□□□□□ -1.91
CHMP24386 ELOCP23-201ENST00000452014 332 ntBASIC3.15□□□□□ -1.91
CHMP24386 AC022364.2-201ENST00000457963 554 ntBASIC3.15□□□□□ -1.91
CHMP24386 RPL27AP5-201ENST00000469428 449 ntBASIC3.15□□□□□ -1.91
CHMP24386 RPL31P41-201ENST00000477967 372 ntBASIC3.15□□□□□ -1.91
CHMP24386 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP24386 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.15□□□□□ -1.91
CHMP24386 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.15□□□□□ -1.91
CHMP24386 AC010493.1-201ENST00000513479 292 ntBASIC3.15□□□□□ -1.91
CHMP24386 RNU6-1183P-201ENST00000517054 60 ntBASIC3.15□□□□□ -1.91
CHMP24386 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP24386 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.15□□□□□ -1.91
CHMP24386 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.15□□□□□ -1.91
CHMP24386 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
CHMP24386 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP24386 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP24386 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
CHMP24386 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP24386 AC009161.2-201ENST00000624626 138 ntBASIC3.15□□□□□ -1.91
CHMP24386 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.15□□□□□ -1.91
CHMP24386 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CHMP24386 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHMP24386 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.91
CHMP24386 MTND5P17-201ENST00000418405 1603 ntBASIC3.15□□□□□ -1.91
CHMP24386 AC032011.1-201ENST00000611703 1549 ntBASIC3.14□□□□□ -1.91
CHMP24386 MTND5P1-201ENST00000445440 1375 ntBASIC3.14□□□□□ -1.91
CHMP24386 AL355596.1-201ENST00000565399 3996 ntBASIC3.14□□□□□ -1.91
CHMP24386 FAM35CP-201ENST00000554755 2470 ntBASIC3.14□□□□□ -1.91
CHMP24386 AL356274.2-201ENST00000624379 3752 ntBASIC3.14□□□□□ -1.91
CHMP24386 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.14□□□□□ -1.91
CHMP24386 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CHMP24386 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
CHMP24386 RNU4-40P-201ENST00000364351 143 ntBASIC3.14□□□□□ -1.91
CHMP24386 Y_RNA.296-201ENST00000364930 108 ntBASIC3.14□□□□□ -1.91
CHMP24386 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHMP24386 Y_RNA.576-201ENST00000384781 102 ntBASIC3.14□□□□□ -1.91
CHMP24386 AL356057.2-201ENST00000403318 432 ntBASIC3.14□□□□□ -1.91
CHMP24386 AL122016.1-201ENST00000403365 367 ntBASIC3.14□□□□□ -1.91
CHMP24386 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP24386 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP24386 AC016907.1-201ENST00000419483 435 ntBASIC3.14□□□□□ -1.91
CHMP24386 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHMP24386 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP24386 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.14□□□□□ -1.91
CHMP24386 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.14□□□□□ -1.91
CHMP24386 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP24386 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.14□□□□□ -1.91
CHMP24386 AC233279.1-201ENST00000455300 423 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms