Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RN7SKP250-201ENST00000363924 321 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 RNU6-595P-201ENST00000363944 107 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 EI24P2-201ENST00000397776 1076 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.24□□□□□ -1.73
VAMP1P23763 AC011933.1-201ENST00000413334 321 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 MCFD2P1-201ENST00000417812 300 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 GPM6BP3-201ENST00000442797 145 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.24□□□□□ -1.73
VAMP1P23763 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.24□□□□□ -1.73
VAMP1P23763 RPS27P26-201ENST00000494583 239 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 LSM3P4-201ENST00000502948 309 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 AC016632.1-201ENST00000503994 196 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 AC021146.2-201ENST00000504736 556 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 SNORA43.3-201ENST00000517240 103 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 AC144568.1-201ENST00000520139 137 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 AC116917.1-201ENST00000520558 305 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 CKS1BP7-201ENST00000522230 235 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.24□□□□□ -1.73
VAMP1P23763 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VAMP1P23763 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.24□□□□□ -1.73
VAMP1P23763 RNF138P2-201ENST00000603490 592 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.24□□□□□ -1.73
VAMP1P23763 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.24□□□□□ -1.73
VAMP1P23763 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.24□□□□□ -1.73
VAMP1P23763 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.24□□□□□ -1.73
VAMP1P23763 AL672167.1-203ENST00000641299 2975 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 MTND5P1-201ENST00000445440 1375 ntBASIC4.24□□□□□ -1.73
VAMP1P23763 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.23□□□□□ -1.73
VAMP1P23763 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VAMP1P23763 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.23□□□□□ -1.73
VAMP1P23763 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
VAMP1P23763 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VAMP1P23763 SNORD50.1-201ENST00000362987 71 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 RNU6-799P-201ENST00000363567 107 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 MIR191-201ENST00000384873 92 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.23□□□□□ -1.73
VAMP1P23763 AP000580.1-201ENST00000404439 358 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.23□□□□□ -1.73
VAMP1P23763 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.23□□□□□ -1.73
VAMP1P23763 AC018865.2-201ENST00000423631 129 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VAMP1P23763 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.23□□□□□ -1.73
VAMP1P23763 RPS29P10-201ENST00000439197 166 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 AC007969.2-201ENST00000441891 191 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 RPS11P7-201ENST00000442125 465 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 AC011753.3-201ENST00000443436 406 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.23□□□□□ -1.73
VAMP1P23763 AC018797.1-201ENST00000510791 255 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 OR7H2P-201ENST00000513483 306 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 Y_RNA.706-201ENST00000516933 99 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 AC091144.1-201ENST00000519573 138 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VAMP1P23763 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.23□□□□□ -1.73
VAMP1P23763 DNAJC8P1-201ENST00000554535 372 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 HSBP1P1-201ENST00000555205 166 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 MIR5696-201ENST00000578474 85 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 AC090897.2-201ENST00000581715 130 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.23□□□□□ -1.73
VAMP1P23763 AL360085.1-201ENST00000604713 532 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 AC007485.1-201ENST00000616755 206 ntBASIC4.23□□□□□ -1.73
VAMP1P23763 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VAMP1P23763 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.23□□□□□ -1.73
VAMP1P23763 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VAMP1P23763 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
VAMP1P23763 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VAMP1P23763 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VAMP1P23763 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VAMP1P23763 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.22□□□□□ -1.73
VAMP1P23763 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
VAMP1P23763 AC002543.1-201ENST00000299783 1954 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AC008669.1-201ENST00000565823 2178 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 SNORD114-19-201ENST00000363072 75 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 RNA5SP232-201ENST00000364144 119 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 RNU6-1141P-201ENST00000364520 107 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 RNU4-56P-201ENST00000364700 142 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 CD24P4-201ENST00000382840 243 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VAMP1P23763 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.22□□□□□ -1.73
VAMP1P23763 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 CKS1BP6-201ENST00000424932 240 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AL591419.1-201ENST00000427423 339 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AL160004.2-201ENST00000432935 350 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AL136097.1-201ENST00000456945 913 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AL445433.1-201ENST00000457507 257 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.22□□□□□ -1.73
VAMP1P23763 AC015911.1-201ENST00000495111 156 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AC025458.1-201ENST00000506046 166 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.22□□□□□ -1.73
VAMP1P23763 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.22□□□□□ -1.73
VAMP1P23763 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.22□□□□□ -1.73
VAMP1P23763 RNU5B-3P-201ENST00000516601 115 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 ATP5J2P6-201ENST00000565203 266 ntBASIC4.22□□□□□ -1.73
VAMP1P23763 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.22□□□□□ -1.73
VAMP1P23763 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.22□□□□□ -1.73
VAMP1P23763 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.22□□□□□ -1.73
VAMP1P23763 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms