Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN1P18031 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN1P18031 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN1P18031 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN1P18031 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN1P18031 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PTPN1P18031 SNORD3E-201ENST00000362899 217 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 RNU6-266P-201ENST00000364225 107 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 RNU6-1303P-201ENST00000364841 107 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN1P18031 RNU6-1040P-201ENST00000383974 107 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 Y_RNA.459-201ENST00000384251 102 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 Y_RNA.480-201ENST00000384364 102 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 MIR134-201ENST00000385258 73 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 RNU6-328P-201ENST00000390887 106 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 RPL21P90-201ENST00000415692 466 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 AC073063.1-201ENST00000434352 607 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 AC083863.1-201ENST00000438811 231 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN1P18031 AC108860.1-201ENST00000484521 383 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.18□□□□□ -1.74
PTPN1P18031 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN1P18031 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN1P18031 RNU6-976P-201ENST00000516086 111 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 SNRPGP16-201ENST00000533275 226 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN1P18031 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.18□□□□□ -1.74
PTPN1P18031 AC025423.5-201ENST00000550230 219 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 AC026371.1-201ENST00000551867 419 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN1P18031 AC093227.2-201ENST00000589357 285 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN1P18031 AC002044.1-201ENST00000606707 158 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 PISRT1.1-201ENST00000616930 107 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN1P18031 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PTPN1P18031 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN1P18031 PNPT1P2-201ENST00000456768 2050 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 AC018555.1-201ENST00000567548 1980 ntBASIC4.18□□□□□ -1.74
PTPN1P18031 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN1P18031 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN1P18031 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN1P18031 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN1P18031 ZNF285B-201ENST00000561698 1767 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN1P18031 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PTPN1P18031 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PTPN1P18031 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN1P18031 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN1P18031 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
PTPN1P18031 RNU6-335P-201ENST00000364563 113 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 RNU6-214P-201ENST00000384130 107 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 Y_RNA.534-201ENST00000384599 112 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 RNU6-95P-201ENST00000384697 107 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 RN7SKP27-201ENST00000410684 333 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN1P18031 MTND3P2-201ENST00000438452 342 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 HMGB1P37-201ENST00000439613 609 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.17□□□□□ -1.74
PTPN1P18031 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN1P18031 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.17□□□□□ -1.74
PTPN1P18031 SNORD108-201ENST00000459332 71 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN1P18031 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.17□□□□□ -1.74
PTPN1P18031 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN1P18031 AC097473.1-201ENST00000508142 408 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 AC096745.1-201ENST00000509945 370 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 Y_RNA.708-201ENST00000516950 96 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 AC087369.1-201ENST00000520775 996 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN1P18031 GNRHR2P1-201ENST00000555315 631 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 AC100830.2-201ENST00000581636 240 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.17□□□□□ -1.74
PTPN1P18031 AC073539.2-201ENST00000597113 165 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 AP000654.2-201ENST00000605633 586 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 AL354798.1-201ENST00000622505 329 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN1P18031 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN1P18031 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN1P18031 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN1P18031 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.17□□□□□ -1.74
PTPN1P18031 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN1P18031 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN1P18031 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PTPN1P18031 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN1P18031 RNA5SP97-201ENST00000365006 84 ntBASIC4.16□□□□□ -1.74
PTPN1P18031 SNORA75B-201ENST00000384053 137 ntBASIC4.16□□□□□ -1.74
PTPN1P18031 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN1P18031 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN1P18031 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN1P18031 RANP8-201ENST00000444720 713 ntBASIC4.16□□□□□ -1.74
PTPN1P18031 RPL21P11-201ENST00000461458 483 ntBASIC4.16□□□□□ -1.74
PTPN1P18031 AC087588.1-201ENST00000462203 316 ntBASIC4.16□□□□□ -1.74
PTPN1P18031 AC092451.1-201ENST00000480211 153 ntBASIC4.16□□□□□ -1.74
PTPN1P18031 AL049874.1-201ENST00000489560 388 ntBASIC4.16□□□□□ -1.74
PTPN1P18031 RPL31P61-201ENST00000496160 376 ntBASIC4.16□□□□□ -1.74
PTPN1P18031 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.16□□□□□ -1.74
PTPN1P18031 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.16□□□□□ -1.74
PTPN1P18031 AC026782.1-201ENST00000512952 449 ntBASIC4.16□□□□□ -1.74
PTPN1P18031 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms