| MUC1 | P15941 | AP1S3-208 | ENST00000446015 | 499 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL390961.1-201 | ENST00000446557 | 319 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | UBA6-AS1-204 | ENST00000502758 | 547 nt | TSL 4 BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RAC1P5-201 | ENST00000512182 | 576 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | TTC39CP1-201 | ENST00000512513 | 755 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC093766.1-202 | ENST00000513400 | 718 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU6-1256P-201 | ENST00000516539 | 103 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU6-1003P-201 | ENST00000517099 | 105 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC02545-201 | ENST00000525381 | 306 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AP000907.2-201 | ENST00000530827 | 353 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MRPS36P5-201 | ENST00000551909 | 298 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | ZNF519P3-201 | ENST00000557158 | 1032 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL157786.1-204 | ENST00000594870 | 506 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC013553.2-201 | ENST00000604244 | 589 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNF219-AS1-205 | ENST00000605996 | 792 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC067747.1-201 | ENST00000608026 | 250 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC007038.2-201 | ENST00000608095 | 740 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC108747.1-201 | ENST00000609508 | 535 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | OR10AB1P-201 | ENST00000609613 | 938 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC027807.2-201 | ENST00000616099 | 408 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC022079.1-201 | ENST00000621546 | 602 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL136313.1-201 | ENST00000624804 | 202 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | ZNF280D-204 | ENST00000558320 | 3666 nt | TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SERPINI2-209 | ENST00000616363 | 1769 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC008568.2-201 | ENST00000623862 | 2313 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| MUC1 | P15941 | ATP8A2P3-201 | ENST00000426792 | 1536 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MYSM1-208 | ENST00000622766 | 6020 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | ANKRD20A17P-201 | ENST00000511745 | 1330 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | OR5B3-201 | ENST00000309403 | 945 nt | APPRIS P1 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | OR6C70-201 | ENST00000327335 | 939 nt | APPRIS P1 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MDM2-205 | ENST00000348801 | 798 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | CRLS1-202 | ENST00000378868 | 994 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | EQTN-201 | ENST00000380031 | 725 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU1-52P-201 | ENST00000384190 | 164 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU5A-2P-201 | ENST00000384337 | 116 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU6-1197P-201 | ENST00000391183 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | CTNNA2-204 | ENST00000409266 | 432 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | HNRNPDLP1-201 | ENST00000412834 | 550 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC104653.1-201 | ENST00000420579 | 578 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | NDUFB4P7-201 | ENST00000423198 | 363 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | BX005214.1-201 | ENST00000427327 | 476 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL138830.1-201 | ENST00000435802 | 402 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPL35AP22-201 | ENST00000436855 | 335 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL158828.1-201 | ENST00000438582 | 197 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC007003.1-202 | ENST00000439318 | 349 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL360091.3-201 | ENST00000442146 | 387 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MTATP6P30-201 | ENST00000443540 | 664 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC018643.1-201 | ENST00000445459 | 414 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL355997.1-202 | ENST00000454361 | 610 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL139109.1-201 | ENST00000455491 | 297 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC093110.1-201 | ENST00000456363 | 602 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC091770.1-201 | ENST00000456513 | 373 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MTND3P7-201 | ENST00000474435 | 343 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL135752.1-201 | ENST00000479477 | 471 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | BET1P1-201 | ENST00000482276 | 359 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPL23AP49-201 | ENST00000492925 | 468 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC02173-201 | ENST00000504132 | 521 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPF2P2-201 | ENST00000504693 | 896 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LIAS-206 | ENST00000513731 | 826 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC010210.1-203 | ENST00000513905 | 260 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC119751.5-201 | ENST00000514077 | 770 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SCARNA15.2-201 | ENST00000516409 | 127 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MIR514B-201 | ENST00000516774 | 80 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU6-840P-201 | ENST00000517275 | 65 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC104232.2-201 | ENST00000519680 | 769 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC106038.2-201 | ENST00000520706 | 568 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MTND4LP18-201 | ENST00000526864 | 291 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC021269.2-201 | ENST00000532318 | 330 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC007834.2-201 | ENST00000536310 | 343 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | EMP1-206 | ENST00000537612 | 505 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | OSBPL9P5-201 | ENST00000542581 | 171 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AP002770.2-201 | ENST00000543613 | 532 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC079584.2-201 | ENST00000548756 | 515 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC012435.2-201 | ENST00000562869 | 361 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC01290-201 | ENST00000566787 | 502 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC105137.2-201 | ENST00000569073 | 466 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC009127.3-201 | ENST00000570531 | 403 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MIR5697-201 | ENST00000578045 | 78 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AF038458.1-201 | ENST00000588406 | 262 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC068790.3-201 | ENST00000602988 | 553 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | HSPE1P7-201 | ENST00000604681 | 321 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | LINC02112-205 | ENST00000606744 | 236 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL031775.1-201 | ENST00000607014 | 887 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | ZRANB2-AS2-218 | ENST00000608360 | 722 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL590491.2-201 | ENST00000614608 | 499 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | OR5B3-202 | ENST00000641865 | 1046 nt | APPRIS P1 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | IGSF11-AS1-201 | ENST00000477009 | 1604 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | USP53-202 | ENST00000450251 | 6072 nt | APPRIS P1 TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | FBXO11-201 | ENST00000402508 | 3844 nt | APPRIS P1 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| MUC1 | P15941 | ATP13A3-201 | ENST00000256031 | 7322 nt | APPRIS P1 TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AC090740.1-201 | ENST00000623193 | 2262 nt | BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | OR2L2-203 | ENST00000642011 | 4225 nt | APPRIS P1 BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | SPA17-201 | ENST00000227135 | 853 nt | APPRIS P1 TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | MEIG1-201 | ENST00000378240 | 507 nt | APPRIS P1 TSL 2 BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU6-533P-201 | ENST00000384144 | 107 nt | BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RNU4-52P-201 | ENST00000384209 | 138 nt | BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | CASP3-203 | ENST00000393588 | 677 nt | TSL 4 BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | RPS4XP3-201 | ENST00000398541 | 413 nt | BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | AL109755.1-201 | ENST00000401791 | 649 nt | BASIC | 2 | □□□□□ -2.09 | | |
| MUC1 | P15941 | TXNP7-201 | ENST00000406296 | 293 nt | BASIC | 2 | □□□□□ -2.09 | | |