Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 snoU109.1-201ENST00000459339 135 ntBASIC2.01□□□□□ -2.09
TPM1P09493 RPL9P6-201ENST00000492764 598 ntBASIC2.01□□□□□ -2.09
TPM1P09493 SMURF2P1-201ENST00000514992 481 ntBASIC2.01□□□□□ -2.09
TPM1P09493 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.01□□□□□ -2.09
TPM1P09493 RNU6-362P-201ENST00000516736 90 ntBASIC2.01□□□□□ -2.09
TPM1P09493 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.01□□□□□ -2.09
TPM1P09493 OR6C7P-201ENST00000547875 934 ntBASIC2.01□□□□□ -2.09
TPM1P09493 MRPS36P5-201ENST00000551909 298 ntBASIC2.01□□□□□ -2.09
TPM1P09493 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TPM1P09493 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.01□□□□□ -2.09
TPM1P09493 MIR4419B-201ENST00000577260 68 ntBASIC2.01□□□□□ -2.09
TPM1P09493 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.01□□□□□ -2.09
TPM1P09493 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
TPM1P09493 AC004908.2-201ENST00000609090 574 ntBASIC2.01□□□□□ -2.09
TPM1P09493 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.01□□□□□ -2.09
TPM1P09493 AC009237.15-201ENST00000610252 501 ntBASIC2.01□□□□□ -2.09
TPM1P09493 MIR5739-201ENST00000619803 80 ntBASIC2.01□□□□□ -2.09
TPM1P09493 AL390862.1-201ENST00000635467 1469 ntBASIC2.01□□□□□ -2.09
TPM1P09493 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TPM1P09493 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
TPM1P09493 RPS20P15-201ENST00000412792 311 ntBASIC2□□□□□ -2.09
TPM1P09493 DNAJA1P2-201ENST00000421360 1197 ntBASIC2□□□□□ -2.09
TPM1P09493 UBE2D3P3-201ENST00000426992 425 ntBASIC2□□□□□ -2.09
TPM1P09493 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2□□□□□ -2.09
TPM1P09493 RPL21P99-201ENST00000480369 423 ntBASIC2□□□□□ -2.09
TPM1P09493 AC110760.3-202ENST00000515177 371 ntBASIC2□□□□□ -2.09
TPM1P09493 RNU6-334P-201ENST00000517072 102 ntBASIC2□□□□□ -2.09
TPM1P09493 AC107953.1-201ENST00000522216 297 ntBASIC2□□□□□ -2.09
TPM1P09493 AC104417.1-201ENST00000523974 751 ntBASIC2□□□□□ -2.09
TPM1P09493 AL121821.2-201ENST00000556081 394 ntBASIC2□□□□□ -2.09
TPM1P09493 DUXAP1-201ENST00000556632 463 ntBASIC2□□□□□ -2.09
TPM1P09493 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2□□□□□ -2.09
TPM1P09493 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2□□□□□ -2.09
TPM1P09493 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2□□□□□ -2.09
TPM1P09493 AF129408.1-201ENST00000608767 431 ntBASIC2□□□□□ -2.09
TPM1P09493 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2□□□□□ -2.09
TPM1P09493 AL163152.1-201ENST00000642001 374 ntBASIC2□□□□□ -2.09
TPM1P09493 RNU6-236P-201ENST00000363886 106 ntBASIC1.99□□□□□ -2.09
TPM1P09493 U3.13-201ENST00000364804 214 ntBASIC1.99□□□□□ -2.09
TPM1P09493 RNU6-432P-201ENST00000384196 109 ntBASIC1.99□□□□□ -2.09
TPM1P09493 RNA5SP425-201ENST00000410336 112 ntBASIC1.99□□□□□ -2.09
TPM1P09493 RNA5SP450-201ENST00000411206 102 ntBASIC1.99□□□□□ -2.09
TPM1P09493 VN1R51P-201ENST00000411675 945 ntBASIC1.99□□□□□ -2.09
TPM1P09493 SNORD56-201ENST00000413522 71 ntBASIC1.99□□□□□ -2.09
TPM1P09493 UBE2FP1-201ENST00000416536 447 ntBASIC1.99□□□□□ -2.09
TPM1P09493 MTND4P15-201ENST00000437913 1033 ntBASIC1.99□□□□□ -2.09
TPM1P09493 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TPM1P09493 MTCO3P45-201ENST00000443036 613 ntBASIC1.99□□□□□ -2.09
TPM1P09493 AL353705.4-201ENST00000449661 238 ntBASIC1.99□□□□□ -2.09
TPM1P09493 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.99□□□□□ -2.09
TPM1P09493 AC034222.1-201ENST00000494052 532 ntBASIC1.99□□□□□ -2.09
TPM1P09493 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TPM1P09493 RNU6-1225P-201ENST00000516336 65 ntBASIC1.99□□□□□ -2.09
TPM1P09493 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.99□□□□□ -2.09
TPM1P09493 AC233702.2-202ENST00000562547 291 ntBASIC1.99□□□□□ -2.09
TPM1P09493 AL031274.2-201ENST00000599419 203 ntBASIC1.99□□□□□ -2.09
TPM1P09493 AC068790.3-201ENST00000602988 553 ntBASIC1.99□□□□□ -2.09
TPM1P09493 AC104763.2-201ENST00000604179 382 ntBASIC1.99□□□□□ -2.09
TPM1P09493 AC069545.1-201ENST00000605671 358 ntBASIC1.99□□□□□ -2.09
TPM1P09493 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.99□□□□□ -2.09
TPM1P09493 AC022202.1-201ENST00000613515 211 ntBASIC1.99□□□□□ -2.09
TPM1P09493 YWHAEP7-203ENST00000622054 312 ntBASIC1.99□□□□□ -2.09
TPM1P09493 AP006437.1-201ENST00000641440 3685 ntBASIC1.99□□□□□ -2.09
TPM1P09493 Z75746.1-201ENST00000440243 2080 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AL079343.1-201ENST00000572358 1771 ntBASIC1.98□□□□□ -2.09
TPM1P09493 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TPM1P09493 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
TPM1P09493 RNU6-1167P-201ENST00000363227 94 ntBASIC1.98□□□□□ -2.09
TPM1P09493 RPL7P27-201ENST00000403775 720 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AL161449.1-201ENST00000414531 1199 ntBASIC1.98□□□□□ -2.09
TPM1P09493 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.98□□□□□ -2.09
TPM1P09493 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
TPM1P09493 PGBD4P6-201ENST00000421501 610 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AL445685.2-201ENST00000422551 342 ntBASIC1.98□□□□□ -2.09
TPM1P09493 DPH3P2-201ENST00000422618 250 ntBASIC1.98□□□□□ -2.09
TPM1P09493 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.98□□□□□ -2.09
TPM1P09493 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.98□□□□□ -2.09
TPM1P09493 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.98□□□□□ -2.09
TPM1P09493 IFNA20P-201ENST00000436840 528 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.98□□□□□ -2.09
TPM1P09493 RPL7P12-201ENST00000446719 750 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AC020550.1-201ENST00000447385 163 ntBASIC1.98□□□□□ -2.09
TPM1P09493 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
TPM1P09493 RPL18AP17-201ENST00000455326 198 ntBASIC1.98□□□□□ -2.09
TPM1P09493 CYP2C59P-201ENST00000457790 269 ntBASIC1.98□□□□□ -2.09
TPM1P09493 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TPM1P09493 AC018437.1-201ENST00000492214 406 ntBASIC1.98□□□□□ -2.09
TPM1P09493 CKS1BP2-201ENST00000497342 240 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AC008628.1-201ENST00000508663 265 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.98□□□□□ -2.09
TPM1P09493 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.98□□□□□ -2.09
TPM1P09493 AC091965.2-201ENST00000512324 613 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AC107393.1-201ENST00000512403 346 ntBASIC1.98□□□□□ -2.09
TPM1P09493 RNU6-703P-201ENST00000516946 107 ntBASIC1.98□□□□□ -2.09
TPM1P09493 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.98□□□□□ -2.09
TPM1P09493 AC087276.1-201ENST00000529659 480 ntBASIC1.98□□□□□ -2.09
TPM1P09493 OR5AL2P-201ENST00000532185 920 ntBASIC1.98□□□□□ -2.09
TPM1P09493 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TPM1P09493 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms