Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 Y_RNA.646-201ENST00000410980 101 ntBASIC5.16□□□□□ -1.58
NEFMP07197 RAC1P6-201ENST00000423911 575 ntBASIC5.16□□□□□ -1.58
NEFMP07197 USP9YP16-201ENST00000430287 407 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AL160004.2-201ENST00000432935 350 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.16□□□□□ -1.58
NEFMP07197 RPL35AP22-201ENST00000436855 335 ntBASIC5.16□□□□□ -1.58
NEFMP07197 Z95327.1-201ENST00000446082 482 ntBASIC5.16□□□□□ -1.58
NEFMP07197 RPS17P13-201ENST00000448974 407 ntBASIC5.16□□□□□ -1.58
NEFMP07197 USP9YP23-201ENST00000455085 407 ntBASIC5.16□□□□□ -1.58
NEFMP07197 HMGB3P30-201ENST00000457863 606 ntBASIC5.16□□□□□ -1.58
NEFMP07197 U8.20-201ENST00000459445 131 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AC022034.3-201ENST00000471393 478 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AP001086.1-201ENST00000494882 321 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.16□□□□□ -1.58
NEFMP07197 AC097473.1-201ENST00000508142 408 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AC008526.1-201ENST00000509149 338 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.16□□□□□ -1.58
NEFMP07197 RNU6-1016P-201ENST00000516689 94 ntBASIC5.16□□□□□ -1.58
NEFMP07197 RNU6-64P-201ENST00000517119 105 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AC087369.1-201ENST00000520775 996 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.16□□□□□ -1.58
NEFMP07197 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.16□□□□□ -1.58
NEFMP07197 AL133271.1-201ENST00000538229 291 ntBASIC5.16□□□□□ -1.58
NEFMP07197 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.16□□□□□ -1.58
NEFMP07197 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.16□□□□□ -1.58
NEFMP07197 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEFMP07197 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEFMP07197 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEFMP07197 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NEFMP07197 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.16□□□□□ -1.58
NEFMP07197 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NEFMP07197 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.16□□□□□ -1.58
NEFMP07197 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NEFMP07197 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.15□□□□□ -1.58
NEFMP07197 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.15□□□□□ -1.58
NEFMP07197 SNORD6-201ENST00000365444 73 ntBASIC5.15□□□□□ -1.59
NEFMP07197 SNORA75B-201ENST00000384053 137 ntBASIC5.15□□□□□ -1.59
NEFMP07197 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NEFMP07197 SOD2P1-201ENST00000396543 562 ntBASIC5.15□□□□□ -1.59
NEFMP07197 RNU2-21P-201ENST00000410368 188 ntBASIC5.15□□□□□ -1.59
NEFMP07197 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEFMP07197 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.15□□□□□ -1.59
NEFMP07197 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.15□□□□□ -1.59
NEFMP07197 AC005094.1-201ENST00000440420 368 ntBASIC5.15□□□□□ -1.59
NEFMP07197 AL359073.1-201ENST00000448036 403 ntBASIC5.15□□□□□ -1.59
NEFMP07197 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.15□□□□□ -1.59
NEFMP07197 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.15□□□□□ -1.59
NEFMP07197 CEACAMP4-201ENST00000457676 421 ntBASIC5.15□□□□□ -1.59
NEFMP07197 RPL21P8-201ENST00000465083 535 ntBASIC5.15□□□□□ -1.59
NEFMP07197 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.15□□□□□ -1.59
NEFMP07197 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.15□□□□□ -1.59
NEFMP07197 RNU6-1092P-201ENST00000516955 87 ntBASIC5.15□□□□□ -1.59
NEFMP07197 RNU6-1271P-201ENST00000517049 105 ntBASIC5.15□□□□□ -1.59
NEFMP07197 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.15□□□□□ -1.59
NEFMP07197 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.15□□□□□ -1.59
NEFMP07197 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.15□□□□□ -1.59
NEFMP07197 AC012531.5-201ENST00000611375 151 ntBASIC5.15□□□□□ -1.59
NEFMP07197 AC005344.1-201ENST00000613391 459 ntBASIC5.15□□□□□ -1.59
NEFMP07197 AL138726.1-201ENST00000614873 333 ntBASIC5.15□□□□□ -1.59
NEFMP07197 AL161637.1-201ENST00000622380 412 ntBASIC5.15□□□□□ -1.59
NEFMP07197 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEFMP07197 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEFMP07197 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.15□□□□□ -1.59
NEFMP07197 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NEFMP07197 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEFMP07197 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEFMP07197 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEFMP07197 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NEFMP07197 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NEFMP07197 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
NEFMP07197 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.14□□□□□ -1.59
NEFMP07197 Y_RNA.80-201ENST00000362996 102 ntBASIC5.14□□□□□ -1.59
NEFMP07197 RNU6-784P-201ENST00000384330 106 ntBASIC5.14□□□□□ -1.59
NEFMP07197 MIR554-201ENST00000384874 96 ntBASIC5.14□□□□□ -1.59
NEFMP07197 RNU6-550P-201ENST00000391057 101 ntBASIC5.14□□□□□ -1.59
NEFMP07197 RN7SKP159-201ENST00000410657 292 ntBASIC5.14□□□□□ -1.59
NEFMP07197 SNORA57.3-201ENST00000411095 141 ntBASIC5.14□□□□□ -1.59
NEFMP07197 RNA5SP107-201ENST00000411358 122 ntBASIC5.14□□□□□ -1.59
NEFMP07197 HMGB3P2-201ENST00000411913 584 ntBASIC5.14□□□□□ -1.59
NEFMP07197 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.14□□□□□ -1.59
NEFMP07197 AC114491.1-201ENST00000416095 246 ntBASIC5.14□□□□□ -1.59
NEFMP07197 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.14□□□□□ -1.59
NEFMP07197 AC011742.1-201ENST00000431448 434 ntBASIC5.14□□□□□ -1.59
NEFMP07197 RPL21P23-201ENST00000446654 460 ntBASIC5.14□□□□□ -1.59
NEFMP07197 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.14□□□□□ -1.59
NEFMP07197 AC025588.3-201ENST00000604182 274 ntBASIC5.14□□□□□ -1.59
NEFMP07197 PRR13P7-201ENST00000605538 430 ntBASIC5.14□□□□□ -1.59
NEFMP07197 AL162373.1-201ENST00000620433 407 ntBASIC5.14□□□□□ -1.59
NEFMP07197 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.14□□□□□ -1.59
NEFMP07197 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NEFMP07197 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEFMP07197 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEFMP07197 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC5.13□□□□□ -1.59
NEFMP07197 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
NEFMP07197 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEFMP07197 RNU6-188P-201ENST00000364207 107 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RNU6-432P-201ENST00000384196 109 ntBASIC5.13□□□□□ -1.59
NEFMP07197 Y_RNA.527-201ENST00000384573 102 ntBASIC5.13□□□□□ -1.59
NEFMP07197 MIR30B-201ENST00000384850 88 ntBASIC5.13□□□□□ -1.59
NEFMP07197 RNA5SP219-201ENST00000390940 113 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms