Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DOAP06340 TNPO1P3-201ENST00000436471 2662 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DOAP06340 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DOAP06340 Y_RNA.100-201ENST00000363141 102 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 U3.12-201ENST00000364498 214 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 Y_RNA.315-201ENST00000365117 102 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 SNORD42.2-201ENST00000365570 69 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 Y_RNA.414-201ENST00000384011 101 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 MIR606-201ENST00000384851 96 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DOAP06340 AL391417.1-201ENST00000404100 426 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 AL583834.1-201ENST00000406943 343 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DOAP06340 RNU2-29P-201ENST00000410423 189 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DOAP06340 Z99755.1-201ENST00000414048 380 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DOAP06340 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DOAP06340 AC236972.2-201ENST00000434979 310 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DOAP06340 RPL21P103-201ENST00000479921 488 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 RPL21P93-201ENST00000480465 489 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 ALDH7A1P3-201ENST00000492517 345 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 MTND5P5-201ENST00000503764 376 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 RNU6-864P-201ENST00000516256 108 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 RNU6-1045P-201ENST00000516321 107 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 SNORA70.19-201ENST00000516717 90 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 Y_RNA.718-201ENST00000517110 102 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DOAP06340 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DOAP06340 AC067852.3-201ENST00000589177 561 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 AC012443.1-201ENST00000605605 231 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 AC130324.3-201ENST00000614165 542 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 AC022149.2-201ENST00000621061 203 ntBASIC4□□□□□ -1.77
HLA-DOAP06340 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DOAP06340 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DOAP06340 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DOAP06340 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DOAP06340 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DOAP06340 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DOAP06340 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 SNORA63C-201ENST00000364578 129 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 RNU6-754P-201ENST00000391166 107 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 MIR548P-201ENST00000408336 84 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 OR6C66P-201ENST00000414917 930 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC091390.3-201ENST00000426478 338 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 GAPDHP27-201ENST00000447427 1020 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 MRPS31P2-201ENST00000451581 518 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 SNRPFP3-201ENST00000457792 225 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 RNU6-1208P-201ENST00000459588 107 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC104806.1-201ENST00000508720 308 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 RNU6-1095P-201ENST00000516148 108 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 AL360157.1-201ENST00000565962 87 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 XIAPP1-201ENST00000603162 600 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 LLPHP1-201ENST00000603571 367 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 Z82243.1-201ENST00000609432 473 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC093838.1-201ENST00000613014 469 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC004696.1-201ENST00000614345 607 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 MIR8057-201ENST00000620957 69 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 AC134503.1-201ENST00000633048 54 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 U6.114-201ENST00000636407 96 ntBASIC3.99□□□□□ -1.77
HLA-DOAP06340 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DOAP06340 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DOAP06340 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 RNU6-356P-201ENST00000384140 107 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 AL359634.1-202ENST00000404721 284 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 Z92545.1-201ENST00000411782 234 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 RPL21P24-201ENST00000413752 448 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 NCOR1P3-201ENST00000420479 303 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 BEND7P1-201ENST00000422058 457 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 RPL23AP67-201ENST00000465341 474 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 TRBVA-201ENST00000498804 316 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 AC108078.2-201ENST00000510750 236 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 SNORA25.17-201ENST00000517184 124 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 MTND4P7-201ENST00000523876 130 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DOAP06340 AC012493.2-201ENST00000595083 291 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 AL162713.1-201ENST00000604480 262 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 AL022099.1-201ENST00000604551 712 ntBASIC3.98□□□□□ -1.77
HLA-DOAP06340 AC005000.2-201ENST00000605468 310 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms