Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC013562.2-201ENST00000611632 603 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC034102.8-201ENST00000615146 484 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC079395.3-201ENST00000615161 484 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC068057.2-201ENST00000624047 895 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 U2.21-201ENST00000637295 81 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 RNU6-512P-201ENST00000364438 103 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 Y_RNA.245-201ENST00000364493 95 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 RNU6-301P-201ENST00000384277 107 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AL513475.1-201ENST00000406602 315 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 USP9YP13-201ENST00000417797 480 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AC072039.1-201ENST00000477611 581 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 MTND2P14-201ENST00000482139 351 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 RN7SL636P-201ENST00000497504 294 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 RPF2P2-201ENST00000504693 896 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AC119751.5-201ENST00000514077 770 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 SCARNA17.1-201ENST00000516211 143 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 SCARNA17.2-201ENST00000516334 143 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 RN7SKP40-201ENST00000517211 242 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 ELOCP32-201ENST00000548625 324 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 ISCA1P3-201ENST00000577104 373 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AP001004.1-201ENST00000582468 324 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AP000403.1-201ENST00000603349 851 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 AL161734.1-201ENST00000609720 557 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 SCARNA17.4-201ENST00000614296 143 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 MIR6766-201ENST00000622641 72 ntBASIC2.03□□□□□ -2.08
HLA-DPB1P04440 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DPB1P04440 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
HLA-DPB1P04440 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 MTND4P1-201ENST00000457501 1466 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 OR5H15-201ENST00000383696 930 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 MIR627-201ENST00000384979 97 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 NDUFS5P1-201ENST00000405668 289 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 BPY2DP-201ENST00000422208 265 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC011233.1-201ENST00000422812 283 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AL358075.3-201ENST00000426289 226 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC109486.1-201ENST00000486833 374 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC105252.1-201ENST00000503089 286 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC234781.5-201ENST00000508429 271 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC113155.1-201ENST00000511141 769 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 SNORA31.3-201ENST00000516029 96 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 RNA5SP82-201ENST00000516707 92 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 RNA5SP165-201ENST00000517142 115 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC109329.2-201ENST00000519658 482 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AP006587.4-201ENST00000526053 529 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AP003461.1-201ENST00000528866 78 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AL356266.1-201ENST00000623311 483 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 AL160394.1-201ENST00000624765 724 ntBASIC2.02□□□□□ -2.09
HLA-DPB1P04440 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DPB1P04440 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DPB1P04440 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
HLA-DPB1P04440 UBE2L2-201ENST00000254302 429 ntBASIC2.01□□□□□ -2.09
HLA-DPB1P04440 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DPB1P04440 RNA5SP289-201ENST00000362332 137 ntBASIC2.01□□□□□ -2.09
HLA-DPB1P04440 RNU6-778P-201ENST00000363269 103 ntBASIC2.01□□□□□ -2.09
HLA-DPB1P04440 RNU6-461P-201ENST00000364195 107 ntBASIC2.01□□□□□ -2.09
HLA-DPB1P04440 SNORA68.1-201ENST00000364537 132 ntBASIC2.01□□□□□ -2.09
HLA-DPB1P04440 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
HLA-DPB1P04440 RNU6-701P-201ENST00000384059 107 ntBASIC2.01□□□□□ -2.09
HLA-DPB1P04440 RNU6-809P-201ENST00000384461 107 ntBASIC2.01□□□□□ -2.09
HLA-DPB1P04440 RNU6-14P-201ENST00000384630 106 ntBASIC2.01□□□□□ -2.09
HLA-DPB1P04440 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DPB1P04440 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DPB1P04440 AC098614.2-201ENST00000426040 255 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms