Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
VTNP04004 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
VTNP04004 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VTNP04004 RNA5SP68-201ENST00000363885 119 ntBASIC2.93□□□□□ -1.94
VTNP04004 Y_RNA.296-201ENST00000364930 108 ntBASIC2.93□□□□□ -1.94
VTNP04004 RNU6-259P-201ENST00000383999 107 ntBASIC2.93□□□□□ -1.94
VTNP04004 RNU6-301P-201ENST00000384277 107 ntBASIC2.93□□□□□ -1.94
VTNP04004 SNORA1.3-201ENST00000384676 136 ntBASIC2.93□□□□□ -1.94
VTNP04004 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VTNP04004 AL139039.1-201ENST00000401900 692 ntBASIC2.93□□□□□ -1.94
VTNP04004 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.93□□□□□ -1.94
VTNP04004 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.93□□□□□ -1.94
VTNP04004 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.93□□□□□ -1.94
VTNP04004 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.93□□□□□ -1.94
VTNP04004 AC018630.2-202ENST00000422992 927 ntBASIC2.93□□□□□ -1.94
VTNP04004 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.93□□□□□ -1.94
VTNP04004 AC137499.1-201ENST00000427602 88 ntBASIC2.93□□□□□ -1.94
VTNP04004 NDUFB4P6-201ENST00000436819 366 ntBASIC2.93□□□□□ -1.94
VTNP04004 AC005094.1-201ENST00000440420 368 ntBASIC2.93□□□□□ -1.94
VTNP04004 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.93□□□□□ -1.94
VTNP04004 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.93□□□□□ -1.94
VTNP04004 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.93□□□□□ -1.94
VTNP04004 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.93□□□□□ -1.94
VTNP04004 RPS3P1-201ENST00000456781 192 ntBASIC2.93□□□□□ -1.94
VTNP04004 RPL31P60-201ENST00000478450 367 ntBASIC2.93□□□□□ -1.94
VTNP04004 HSPE1P6-201ENST00000479457 291 ntBASIC2.93□□□□□ -1.94
VTNP04004 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.93□□□□□ -1.94
VTNP04004 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.93□□□□□ -1.94
VTNP04004 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.93□□□□□ -1.94
VTNP04004 RNA5SP148-201ENST00000516527 94 ntBASIC2.93□□□□□ -1.94
VTNP04004 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.93□□□□□ -1.94
VTNP04004 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.93□□□□□ -1.94
VTNP04004 AC128657.1-201ENST00000549459 145 ntBASIC2.93□□□□□ -1.94
VTNP04004 AC087883.1-201ENST00000551882 391 ntBASIC2.93□□□□□ -1.94
VTNP04004 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.93□□□□□ -1.94
VTNP04004 AL391840.1-201ENST00000571144 367 ntBASIC2.93□□□□□ -1.94
VTNP04004 AC005951.2-201ENST00000576282 495 ntBASIC2.93□□□□□ -1.94
VTNP04004 MIR3167-201ENST00000579623 85 ntBASIC2.93□□□□□ -1.94
VTNP04004 MIR3605-201ENST00000583214 100 ntBASIC2.93□□□□□ -1.94
VTNP04004 AC068790.6-201ENST00000602558 258 ntBASIC2.93□□□□□ -1.94
VTNP04004 AC245014.2-201ENST00000603689 287 ntBASIC2.93□□□□□ -1.94
VTNP04004 AL136363.1-201ENST00000605349 337 ntBASIC2.93□□□□□ -1.94
VTNP04004 AC246785.4-201ENST00000605374 287 ntBASIC2.93□□□□□ -1.94
VTNP04004 AC010133.1-201ENST00000615809 842 ntBASIC2.93□□□□□ -1.94
VTNP04004 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VTNP04004 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VTNP04004 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VTNP04004 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.92□□□□□ -1.94
VTNP04004 OR4G2P-202ENST00000641004 1759 ntBASIC2.92□□□□□ -1.94
VTNP04004 AC008264.2-201ENST00000610193 3731 ntBASIC2.92□□□□□ -1.94
VTNP04004 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
VTNP04004 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VTNP04004 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VTNP04004 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VTNP04004 SNORD56.2-201ENST00000363242 71 ntBASIC2.92□□□□□ -1.94
VTNP04004 RNU4-1-201ENST00000363925 141 ntBASIC2.92□□□□□ -1.94
VTNP04004 SNORA36C-201ENST00000384289 132 ntBASIC2.92□□□□□ -1.94
VTNP04004 RPS4XP3-201ENST00000398541 413 ntBASIC2.92□□□□□ -1.94
VTNP04004 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.92□□□□□ -1.94
VTNP04004 SDCBPP3-201ENST00000419629 891 ntBASIC2.92□□□□□ -1.94
VTNP04004 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.92□□□□□ -1.94
VTNP04004 AC010975.2-201ENST00000427781 588 ntBASIC2.92□□□□□ -1.94
VTNP04004 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.92□□□□□ -1.94
VTNP04004 MTND1P12-201ENST00000455231 147 ntBASIC2.92□□□□□ -1.94
VTNP04004 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.92□□□□□ -1.94
VTNP04004 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.92□□□□□ -1.94
VTNP04004 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.92□□□□□ -1.94
VTNP04004 RNU6-1220P-201ENST00000517126 108 ntBASIC2.92□□□□□ -1.94
VTNP04004 RNU6-711P-201ENST00000517255 106 ntBASIC2.92□□□□□ -1.94
VTNP04004 AC022616.3-201ENST00000523940 148 ntBASIC2.92□□□□□ -1.94
VTNP04004 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VTNP04004 AC011979.2-201ENST00000527568 352 ntBASIC2.92□□□□□ -1.94
VTNP04004 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.92□□□□□ -1.94
VTNP04004 ARL2BPP2-201ENST00000550907 489 ntBASIC2.92□□□□□ -1.94
VTNP04004 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.92□□□□□ -1.94
VTNP04004 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.92□□□□□ -1.94
VTNP04004 MIR4635-201ENST00000583759 79 ntBASIC2.92□□□□□ -1.94
VTNP04004 AC099778.2-201ENST00000610904 211 ntBASIC2.92□□□□□ -1.94
VTNP04004 SDR42E1P2-201ENST00000614861 481 ntBASIC2.92□□□□□ -1.94
VTNP04004 SNHG22-203ENST00000617833 660 ntBASIC2.92□□□□□ -1.94
VTNP04004 AC138649.3-201ENST00000622154 254 ntBASIC2.92□□□□□ -1.94
VTNP04004 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
VTNP04004 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
VTNP04004 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VTNP04004 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
VTNP04004 AL355596.1-201ENST00000565399 3996 ntBASIC2.91□□□□□ -1.94
VTNP04004 AC005183.1-201ENST00000603687 1979 ntBASIC2.91□□□□□ -1.94
VTNP04004 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.91□□□□□ -1.94
VTNP04004 Y_RNA.582-201ENST00000391023 95 ntBASIC2.91□□□□□ -1.94
VTNP04004 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VTNP04004 RNU2-36P-201ENST00000410361 191 ntBASIC2.91□□□□□ -1.94
VTNP04004 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.91□□□□□ -1.94
VTNP04004 AL139413.1-201ENST00000421309 217 ntBASIC2.91□□□□□ -1.94
VTNP04004 PIGFP2-201ENST00000421400 651 ntBASIC2.91□□□□□ -1.94
VTNP04004 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.91□□□□□ -1.94
VTNP04004 USP12PX-201ENST00000432383 1057 ntBASIC2.91□□□□□ -1.94
VTNP04004 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.91□□□□□ -1.94
VTNP04004 AL136380.1-201ENST00000447970 162 ntBASIC2.91□□□□□ -1.94
VTNP04004 AL590664.1-201ENST00000448065 339 ntBASIC2.91□□□□□ -1.94
VTNP04004 SNRPGP6-201ENST00000451124 220 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms