Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND1P03886 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND1P03886 AC091805.2-201ENST00000603848 235 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AL137843.1-201ENST00000605078 385 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AL359198.2-201ENST00000611836 194 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AL133173.2-201ENST00000614270 90 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 SDR42E1P2-201ENST00000614861 481 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 MTND1P37-201ENST00000636562 264 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MT-ND1P03886 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND1P03886 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
MT-ND1P03886 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
MT-ND1P03886 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
MT-ND1P03886 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
MT-ND1P03886 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.65□□□□□ -1.98
MT-ND1P03886 SNORA9.2-201ENST00000365361 133 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
MT-ND1P03886 RNU6-39P-201ENST00000384344 107 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 Y_RNA.517-201ENST00000384551 106 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
MT-ND1P03886 AL359634.1-202ENST00000404721 284 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
MT-ND1P03886 MTND3P17-201ENST00000416968 344 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AL358075.3-201ENST00000426289 226 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AC104651.1-201ENST00000427559 735 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND1P03886 RPL36AP6-201ENST00000435770 321 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 AC073614.1-201ENST00000438690 650 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND1P03886 RPS15AP27-201ENST00000449183 343 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND1P03886 RBM43P1-201ENST00000476891 1081 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 RPL31P41-201ENST00000477967 372 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AC100870.1-201ENST00000522035 505 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 SUB1P1-201ENST00000524415 382 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AC010546.1-201ENST00000569391 485 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AC146944.4-201ENST00000602697 718 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 NDUFA8P1-201ENST00000605525 367 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND1P03886 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.65□□□□□ -1.99
MT-ND1P03886 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.65□□□□□ -1.99
MT-ND1P03886 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
MT-ND1P03886 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
MT-ND1P03886 AC009487.2-201ENST00000420969 6821 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
MT-ND1P03886 CR848007.1-201ENST00000442354 1699 ntBASIC2.65□□□□□ -1.99
MT-ND1P03886 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND1P03886 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND1P03886 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND1P03886 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 SNORA38.1-201ENST00000364172 131 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 RNU6-1180P-201ENST00000364935 107 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 RNU6-282P-201ENST00000365357 103 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 RNU6-140P-201ENST00000384566 108 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 MIR34B-201ENST00000385076 84 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 MIR670-201ENST00000390142 98 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND1P03886 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AC093106.2-201ENST00000428212 385 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AL358934.1-201ENST00000432346 324 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AC119618.1-201ENST00000434191 222 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND1P03886 WASF1P1-201ENST00000447560 1131 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AL358232.1-201ENST00000448030 501 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 MTCYBP1-201ENST00000454315 1119 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND1P03886 RPL37P25-201ENST00000507308 276 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND1P03886 RN7SKP298-201ENST00000515950 94 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 RNU6-826P-201ENST00000516827 104 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 MTCO2P4-201ENST00000517968 247 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AP003392.2-201ENST00000527269 208 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND1P03886 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.64□□□□□ -1.99
MT-ND1P03886 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.64□□□□□ -1.99
MT-ND1P03886 MIR4429-201ENST00000580105 73 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 MIR3682-201ENST00000581338 84 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AC008277.2-201ENST00000605196 797 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AC103710.1-201ENST00000610003 901 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AC109347.2-201ENST00000610220 349 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms