Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL3A1P02461 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL3A1P02461 AC114546.3-201ENST00000623582 1734 ntBASIC3.84□□□□□ -1.79
COL3A1P02461 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
COL3A1P02461 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL3A1P02461 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.84□□□□□ -1.79
COL3A1P02461 AC011155.1-201ENST00000316512 456 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
COL3A1P02461 RNU6-169P-201ENST00000365336 107 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
COL3A1P02461 RNU6-1148P-201ENST00000410992 104 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 NDUFB4P5-201ENST00000415445 361 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 RPS29P6-201ENST00000438196 145 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 HMGN3P1-201ENST00000453847 193 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.84□□□□□ -1.8
COL3A1P02461 RNA5SP356-201ENST00000515972 94 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 RNU6-714P-201ENST00000516963 103 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.84□□□□□ -1.8
COL3A1P02461 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.84□□□□□ -1.8
COL3A1P02461 DNAJC8P1-201ENST00000554535 372 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.84□□□□□ -1.8
COL3A1P02461 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.84□□□□□ -1.8
COL3A1P02461 MIR3118-1-201ENST00000581787 76 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
COL3A1P02461 AC110741.2-201ENST00000605278 268 ntBASIC3.84□□□□□ -1.8
COL3A1P02461 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.84□□□□□ -1.8
COL3A1P02461 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL3A1P02461 AC006020.1-201ENST00000420179 1854 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL3A1P02461 RNU6-1309P-201ENST00000363305 108 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 SNORA22B-201ENST00000383876 138 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 RNU6-657P-201ENST00000383904 107 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 RNU6-1297P-201ENST00000384415 104 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AL591416.1-201ENST00000404015 867 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 RPL23AP48-201ENST00000406913 488 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 TPMTP2-201ENST00000414372 726 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AC019097.1-201ENST00000424783 735 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.83□□□□□ -1.8
COL3A1P02461 AL589765.3-201ENST00000446084 462 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 DDX3P2-201ENST00000446138 111 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AC079781.2-201ENST00000446424 169 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 RPL21P41-201ENST00000459863 264 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 RPL31P50-201ENST00000471002 296 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AL163973.1-201ENST00000484753 577 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AC034222.1-201ENST00000494052 532 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 TXNP6-201ENST00000510190 310 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 Y_RNA.720-201ENST00000517166 92 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.83□□□□□ -1.8
COL3A1P02461 IGKV2-36-201ENST00000519999 223 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AF279873.1-201ENST00000523393 313 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AL389895.1-201ENST00000554127 252 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.83□□□□□ -1.8
COL3A1P02461 AC006270.2-201ENST00000578523 652 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 MIR3162-201ENST00000581818 82 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 MIR4503-201ENST00000582187 83 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.83□□□□□ -1.8
COL3A1P02461 VN1R84P-201ENST00000593697 235 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AL355598.1-201ENST00000604169 202 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AC021646.1-201ENST00000605469 484 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AC004908.2-201ENST00000609090 574 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 AL356274.1-201ENST00000617064 410 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL3A1P02461 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.83□□□□□ -1.8
COL3A1P02461 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL3A1P02461 AL049780.3-201ENST00000624612 1583 ntBASIC3.83□□□□□ -1.8
COL3A1P02461 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL3A1P02461 AC107021.2-201ENST00000567714 2095 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 Y_RNA.100-201ENST00000363141 102 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 Y_RNA.197-201ENST00000364004 102 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 RNU6-996P-201ENST00000365438 107 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.82□□□□□ -1.8
COL3A1P02461 Y_RNA.395-201ENST00000383945 109 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 Y_RNA.605-201ENST00000410577 105 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 RN7SKP247-201ENST00000411094 308 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.82□□□□□ -1.8
COL3A1P02461 HMGB3P10-201ENST00000434734 572 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.82□□□□□ -1.8
COL3A1P02461 MTND3P16-201ENST00000452205 344 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.82□□□□□ -1.8
COL3A1P02461 AC003982.1-202ENST00000469928 248 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AC104563.1-201ENST00000476147 376 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.82□□□□□ -1.8
COL3A1P02461 MTCO1P29-201ENST00000496868 288 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AC005741.1-201ENST00000511094 432 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.82□□□□□ -1.8
COL3A1P02461 RN7SKP43-201ENST00000516173 320 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 RNU6-264P-201ENST00000517134 104 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.82□□□□□ -1.8
COL3A1P02461 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.82□□□□□ -1.8
COL3A1P02461 COX6CP8-201ENST00000522620 226 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 SUB1P1-201ENST00000524415 382 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.82□□□□□ -1.8
COL3A1P02461 AC123904.2-201ENST00000548059 300 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.82□□□□□ -1.8
COL3A1P02461 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.82□□□□□ -1.8
COL3A1P02461 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.82□□□□□ -1.8
COL3A1P02461 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.82□□□□□ -1.8
COL3A1P02461 MIR3149-201ENST00000584629 83 ntBASIC3.82□□□□□ -1.8
COL3A1P02461 AC104984.5-201ENST00000586878 94 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms