Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RPL35AP22-201ENST00000436855 335 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 MTND1P33-201ENST00000446251 917 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 PABPC1P3-201ENST00000469174 459 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AC104685.1-201ENST00000502445 371 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL1A1P02452 ARL2BPP4-201ENST00000506854 471 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 AL627230.6-201ENST00000611129 280 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AL592148.2-201ENST00000612210 372 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 OR5H6-203ENST00000642105 978 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL1A1P02452 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC068700.1-201ENST00000565862 3754 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
COL1A1P02452 RNU6-543P-201ENST00000362576 108 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AC016769.3-201ENST00000396562 315 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.43□□□□□ -2.18
COL1A1P02452 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.43□□□□□ -2.18
COL1A1P02452 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.43□□□□□ -2.18
COL1A1P02452 AIMP1P2-201ENST00000425294 312 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC004383.1-201ENST00000438135 289 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 SDCBPP1-201ENST00000440192 890 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 PMCHL2-203ENST00000457791 237 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC055731.1-201ENST00000474387 401 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 RPS27P23-201ENST00000487608 251 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AC105252.1-201ENST00000503089 286 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC112518.2-201ENST00000508565 425 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 SNORA48.10-201ENST00000516965 160 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AC019176.1-201ENST00000518519 225 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.43□□□□□ -2.18
COL1A1P02452 AC016542.1-201ENST00000608259 493 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AC021851.1-201ENST00000608537 1082 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 AC083865.1-201ENST00000636634 831 ntBASIC1.43□□□□□ -2.18
COL1A1P02452 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL1A1P02452 RNU6-1339P-201ENST00000363574 91 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 SNORD82-201ENST00000365530 70 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 TAF9BP2-201ENST00000400856 499 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 RNU6-1328P-201ENST00000410938 106 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 RPP40P1-201ENST00000426762 456 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.42□□□□□ -2.18
COL1A1P02452 AC016691.1-201ENST00000441321 413 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 RAC1P7-201ENST00000445367 377 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 BMI1P1-201ENST00000445879 941 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.42□□□□□ -2.18
COL1A1P02452 SNRPFP3-201ENST00000457792 225 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 OR9N1P-202ENST00000494289 481 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 AC026801.1-201ENST00000497178 464 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 HMGB3P17-201ENST00000504195 649 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 RNU6-27P-201ENST00000516146 107 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 Y_RNA.681-201ENST00000516445 113 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.42□□□□□ -2.18
COL1A1P02452 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.42□□□□□ -2.18
COL1A1P02452 AP000907.2-201ENST00000530827 353 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 AC118273.2-201ENST00000532092 465 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 CR383656.8-201ENST00000549046 145 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 AC004217.3-201ENST00000551552 878 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
COL1A1P02452 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.42□□□□□ -2.18
COL1A1P02452 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.42□□□□□ -2.18
COL1A1P02452 AC091925.2-201ENST00000625059 256 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 MKKS-204ENST00000639674 192 ntBASIC1.42□□□□□ -2.18
COL1A1P02452 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COL1A1P02452 OR1L1-202ENST00000373686 1083 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 AL589655.1-201ENST00000405398 482 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.41□□□□□ -2.18
COL1A1P02452 AL356867.1-201ENST00000429623 299 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.41□□□□□ -2.18
COL1A1P02452 Z82190.1-201ENST00000454534 490 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.41□□□□□ -2.18
COL1A1P02452 AC092902.1-201ENST00000486999 259 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.41□□□□□ -2.18
COL1A1P02452 AC022447.1-201ENST00000515358 464 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 RNU2-19P-201ENST00000517288 84 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.41□□□□□ -2.18
COL1A1P02452 CYCSP2-201ENST00000558168 301 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 MIR4287-201ENST00000579398 78 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 AC105224.1-201ENST00000587055 421 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 AC025588.2-201ENST00000604851 466 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 AC243773.3-201ENST00000613270 256 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 AC020658.4-201ENST00000613987 684 ntBASIC1.41□□□□□ -2.18
COL1A1P02452 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
COL1A1P02452 DDX43P2-201ENST00000604753 1354 ntBASIC1.4□□□□□ -2.18
COL1A1P02452 RNU6-1155P-201ENST00000363554 107 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms