Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.09□□□□□ -2.23
TNFP01375 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.09□□□□□ -2.23
TNFP01375 AC015922.2-201ENST00000435593 184 ntBASIC1.09□□□□□ -2.23
TNFP01375 UBE2V1P5-201ENST00000440070 405 ntBASIC1.09□□□□□ -2.23
TNFP01375 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.09□□□□□ -2.23
TNFP01375 HMGN2P10-201ENST00000448085 265 ntBASIC1.09□□□□□ -2.23
TNFP01375 AL096803.2-201ENST00000450032 677 ntBASIC1.09□□□□□ -2.23
TNFP01375 HMGB1P35-201ENST00000503360 598 ntBASIC1.09□□□□□ -2.23
TNFP01375 AC138853.1-201ENST00000503549 823 ntBASIC1.09□□□□□ -2.23
TNFP01375 AC098591.2-201ENST00000510152 315 ntBASIC1.09□□□□□ -2.23
TNFP01375 RNA5SP490-201ENST00000517141 136 ntBASIC1.09□□□□□ -2.23
TNFP01375 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.09□□□□□ -2.23
TNFP01375 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.09□□□□□ -2.23
TNFP01375 AL031274.2-201ENST00000599419 203 ntBASIC1.09□□□□□ -2.23
TNFP01375 KC877982.1-201ENST00000602313 470 ntBASIC1.09□□□□□ -2.23
TNFP01375 AC103810.8-201ENST00000607347 118 ntBASIC1.09□□□□□ -2.23
TNFP01375 AC090132.2-201ENST00000615881 347 ntBASIC1.09□□□□□ -2.23
TNFP01375 AC027514.1-201ENST00000588561 1603 ntBASIC1.08□□□□□ -2.24
TNFP01375 MIR26B-201ENST00000362251 77 ntBASIC1.08□□□□□ -2.24
TNFP01375 AL355615.1-201ENST00000406187 641 ntBASIC1.08□□□□□ -2.24
TNFP01375 RPL30P13-201ENST00000418873 348 ntBASIC1.08□□□□□ -2.24
TNFP01375 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFP01375 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFP01375 RPL30P4-201ENST00000429309 333 ntBASIC1.08□□□□□ -2.24
TNFP01375 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.08□□□□□ -2.24
TNFP01375 AL049734.2-201ENST00000441066 616 ntBASIC1.08□□□□□ -2.24
TNFP01375 MTCO1P48-201ENST00000448024 1096 ntBASIC1.08□□□□□ -2.24
TNFP01375 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFP01375 PABPC1P3-201ENST00000469174 459 ntBASIC1.08□□□□□ -2.24
TNFP01375 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.08□□□□□ -2.24
TNFP01375 AC006390.1-201ENST00000508068 283 ntBASIC1.08□□□□□ -2.24
TNFP01375 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.08□□□□□ -2.24
TNFP01375 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFP01375 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.08□□□□□ -2.24
TNFP01375 DUXAP5-201ENST00000529668 529 ntBASIC1.08□□□□□ -2.24
TNFP01375 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.08□□□□□ -2.24
TNFP01375 AC025918.2-201ENST00000558683 763 ntBASIC1.08□□□□□ -2.24
TNFP01375 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.08□□□□□ -2.24
TNFP01375 AC022202.1-201ENST00000613515 211 ntBASIC1.08□□□□□ -2.24
TNFP01375 U6.107-201ENST00000637108 79 ntBASIC1.08□□□□□ -2.24
TNFP01375 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
TNFP01375 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.08□□□□□ -2.24
TNFP01375 OR4G1P-203ENST00000641984 1631 ntBASIC1.07□□□□□ -2.24
TNFP01375 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.07□□□□□ -2.24
TNFP01375 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.07□□□□□ -2.24
TNFP01375 MIR96-201ENST00000362288 78 ntBASIC1.07□□□□□ -2.24
TNFP01375 SNORD114-22-201ENST00000365423 72 ntBASIC1.07□□□□□ -2.24
TNFP01375 SNORD82-201ENST00000365530 70 ntBASIC1.07□□□□□ -2.24
TNFP01375 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.07□□□□□ -2.24
TNFP01375 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
TNFP01375 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.07□□□□□ -2.24
TNFP01375 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.07□□□□□ -2.24
TNFP01375 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TNFP01375 PIGFP3-201ENST00000441918 722 ntBASIC1.07□□□□□ -2.24
TNFP01375 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
TNFP01375 SNORA31.6-201ENST00000516241 130 ntBASIC1.07□□□□□ -2.24
TNFP01375 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.07□□□□□ -2.24
TNFP01375 AC074051.3-201ENST00000570238 358 ntBASIC1.07□□□□□ -2.24
TNFP01375 AC015688.2-201ENST00000584523 262 ntBASIC1.07□□□□□ -2.24
TNFP01375 AL137246.1-201ENST00000607072 977 ntBASIC1.07□□□□□ -2.24
TNFP01375 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
TNFP01375 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
TNFP01375 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.07□□□□□ -2.24
TNFP01375 AC091812.1-201ENST00000432235 1948 ntBASIC1.07□□□□□ -2.24
TNFP01375 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TNFP01375 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TNFP01375 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
TNFP01375 OR6C66P-201ENST00000414917 930 ntBASIC1.06□□□□□ -2.24
TNFP01375 MTND5P25-201ENST00000430499 799 ntBASIC1.06□□□□□ -2.24
TNFP01375 AC008379.1-201ENST00000463655 464 ntBASIC1.06□□□□□ -2.24
TNFP01375 SUMO1P1-201ENST00000497904 306 ntBASIC1.06□□□□□ -2.24
TNFP01375 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.06□□□□□ -2.24
TNFP01375 AC114801.2-201ENST00000503825 781 ntBASIC1.06□□□□□ -2.24
TNFP01375 RNU6-27P-201ENST00000516146 107 ntBASIC1.06□□□□□ -2.24
TNFP01375 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFP01375 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.06□□□□□ -2.24
TNFP01375 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.06□□□□□ -2.24
TNFP01375 AP001485.1-201ENST00000604799 199 ntBASIC1.06□□□□□ -2.24
TNFP01375 AP005212.4-201ENST00000614206 710 ntBASIC1.06□□□□□ -2.24
TNFP01375 AC006213.4-201ENST00000616184 634 ntBASIC1.06□□□□□ -2.24
TNFP01375 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.06□□□□□ -2.24
TNFP01375 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TNFP01375 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
TNFP01375 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.06□□□□□ -2.24
TNFP01375 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TNFP01375 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TNFP01375 RNU6-1080P-201ENST00000383982 107 ntBASIC1.05□□□□□ -2.24
TNFP01375 RNA5SP465-201ENST00000391195 109 ntBASIC1.05□□□□□ -2.24
TNFP01375 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFP01375 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFP01375 AC009238.1-201ENST00000442165 424 ntBASIC1.05□□□□□ -2.24
TNFP01375 AC009237.6-201ENST00000446969 424 ntBASIC1.05□□□□□ -2.24
TNFP01375 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFP01375 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFP01375 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.05□□□□□ -2.24
TNFP01375 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFP01375 RNU6-362P-201ENST00000516736 90 ntBASIC1.05□□□□□ -2.24
TNFP01375 SNORA44.1-201ENST00000517031 108 ntBASIC1.05□□□□□ -2.24
TNFP01375 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFP01375 AC008015.1-201ENST00000555505 465 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms