Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
DDX58O95786 RPS4XP8-201ENST00000402039 771 ntBASIC3.42□□□□□ -1.86
DDX58O95786 RNU2-36P-201ENST00000410361 191 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC127391.1-201ENST00000411737 98 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC007283.2-201ENST00000424739 197 ntBASIC3.42□□□□□ -1.86
DDX58O95786 ISCA1P6-201ENST00000427740 390 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX58O95786 SNRPEP9-201ENST00000436794 238 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX58O95786 MTND6P13-201ENST00000443510 523 ntBASIC3.42□□□□□ -1.86
DDX58O95786 MTND1P27-201ENST00000451117 902 ntBASIC3.42□□□□□ -1.86
DDX58O95786 CECR9-201ENST00000453421 199 ntBASIC3.42□□□□□ -1.86
DDX58O95786 RPL26P9-201ENST00000457466 433 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX58O95786 RNU6-953P-201ENST00000459154 107 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC090525.1-201ENST00000479116 478 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX58O95786 RNU2-46P-201ENST00000517038 113 ntBASIC3.42□□□□□ -1.86
DDX58O95786 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
DDX58O95786 ARL2BPP2-201ENST00000550907 489 ntBASIC3.42□□□□□ -1.86
DDX58O95786 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX58O95786 AC040904.1-201ENST00000590850 223 ntBASIC3.42□□□□□ -1.86
DDX58O95786 MTND4LP5-201ENST00000605152 292 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC004805.2-201ENST00000605382 482 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC135507.1-201ENST00000607214 561 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC097065.2-201ENST00000608159 533 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AL133173.2-201ENST00000614270 90 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC068880.5-201ENST00000624331 290 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC092608.2-201ENST00000624427 218 ntBASIC3.42□□□□□ -1.86
DDX58O95786 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX58O95786 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX58O95786 AC108206.1-201ENST00000570186 4159 ntBASIC3.41□□□□□ -1.86
DDX58O95786 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX58O95786 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX58O95786 RNU5E-1-201ENST00000362477 120 ntBASIC3.41□□□□□ -1.86
DDX58O95786 RNU6-884P-201ENST00000363889 107 ntBASIC3.41□□□□□ -1.86
DDX58O95786 AL512633.1-201ENST00000399931 655 ntBASIC3.41□□□□□ -1.86
DDX58O95786 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX58O95786 ZNF90P2-204ENST00000419323 1075 ntBASIC3.41□□□□□ -1.86
DDX58O95786 ELOCP4-201ENST00000420090 333 ntBASIC3.41□□□□□ -1.86
DDX58O95786 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX58O95786 AL714022.1-201ENST00000439897 151 ntBASIC3.41□□□□□ -1.86
DDX58O95786 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX58O95786 ARL4AP2-201ENST00000507378 601 ntBASIC3.41□□□□□ -1.86
DDX58O95786 RNU7-51P-201ENST00000516560 62 ntBASIC3.41□□□□□ -1.86
DDX58O95786 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
DDX58O95786 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX58O95786 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX58O95786 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX58O95786 DUXAP4-201ENST00000603046 613 ntBASIC3.41□□□□□ -1.86
DDX58O95786 AC131902.3-201ENST00000611767 581 ntBASIC3.41□□□□□ -1.86
DDX58O95786 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.41□□□□□ -1.86
DDX58O95786 AP001506.1-201ENST00000615444 211 ntBASIC3.41□□□□□ -1.86
DDX58O95786 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX58O95786 AC010680.1-201ENST00000590024 3590 ntBASIC3.41□□□□□ -1.86
DDX58O95786 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX58O95786 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
DDX58O95786 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.4□□□□□ -1.86
DDX58O95786 RNU6-288P-201ENST00000363690 104 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX58O95786 RNU2-68P-201ENST00000410878 191 ntBASIC3.4□□□□□ -1.87
DDX58O95786 RNU6-195P-201ENST00000411352 109 ntBASIC3.4□□□□□ -1.87
DDX58O95786 HMGN2P30-201ENST00000423237 256 ntBASIC3.4□□□□□ -1.87
DDX58O95786 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX58O95786 ELOCP14-201ENST00000428070 331 ntBASIC3.4□□□□□ -1.87
DDX58O95786 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX58O95786 ELOCP7-201ENST00000439968 331 ntBASIC3.4□□□□□ -1.87
DDX58O95786 PGBD4P3-201ENST00000440731 581 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AL022238.1-201ENST00000442557 355 ntBASIC3.4□□□□□ -1.87
DDX58O95786 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX58O95786 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX58O95786 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX58O95786 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX58O95786 SNORD42A-201ENST00000459584 64 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AC091179.1-201ENST00000461606 579 ntBASIC3.4□□□□□ -1.87
DDX58O95786 RNA5SP471-201ENST00000516971 106 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AP006587.4-201ENST00000526053 529 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AP000873.5-201ENST00000533906 236 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX58O95786 RPS3AP4-201ENST00000555161 764 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AC027807.1-201ENST00000559921 996 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AC104763.2-201ENST00000604179 382 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AL161798.1-201ENST00000604630 131 ntBASIC3.4□□□□□ -1.87
DDX58O95786 RN7SKP299-201ENST00000606679 301 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AC005046.1-201ENST00000608515 625 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AL161734.1-201ENST00000609720 557 ntBASIC3.4□□□□□ -1.87
DDX58O95786 AC103710.2-201ENST00000609912 942 ntBASIC3.4□□□□□ -1.87
DDX58O95786 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX58O95786 AC110079.1-202ENST00000635213 138 ntBASIC3.4□□□□□ -1.87
DDX58O95786 MTND5P7-201ENST00000413558 1798 ntBASIC3.4□□□□□ -1.87
DDX58O95786 TEX21P-201ENST00000447107 1476 ntBASIC3.4□□□□□ -1.87
DDX58O95786 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX58O95786 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DDX58O95786 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX58O95786 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
DDX58O95786 U8.3-201ENST00000363321 132 ntBASIC3.39□□□□□ -1.87
DDX58O95786 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
DDX58O95786 RPL23AP32-201ENST00000395315 459 ntBASIC3.39□□□□□ -1.87
DDX58O95786 MIR888-201ENST00000401186 77 ntBASIC3.39□□□□□ -1.87
DDX58O95786 AL356057.3-201ENST00000402607 340 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms