Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.03□□□□□ -2.24
POLR1AO95602 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.03□□□□□ -2.24
POLR1AO95602 AC004812.1-201ENST00000540773 146 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 AC006270.3-201ENST00000605967 1036 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 AC015726.3-201ENST00000624501 418 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1AO95602 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1AO95602 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.03□□□□□ -2.24
POLR1AO95602 C1DP3-201ENST00000455013 423 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 RNU11-2P-201ENST00000516898 142 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 SNORA31.25-201ENST00000517242 134 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.03□□□□□ -2.24
POLR1AO95602 AC243829.3-201ENST00000622177 108 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1AO95602 ZNF37BP-203ENST00000452306 1352 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
POLR1AO95602 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
POLR1AO95602 RNA5SP347-201ENST00000362445 119 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 RNU6-942P-201ENST00000363002 107 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 RNU1-105P-201ENST00000363470 161 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 TMEM167AP1-201ENST00000423409 219 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 AL365496.1-201ENST00000426885 215 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.02□□□□□ -2.25
POLR1AO95602 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.02□□□□□ -2.25
POLR1AO95602 RPL23AP3-201ENST00000453844 468 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.02□□□□□ -2.25
POLR1AO95602 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
POLR1AO95602 RNU6-496P-201ENST00000516145 99 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 RNU2-19P-201ENST00000517288 84 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 AC025423.2-201ENST00000537570 439 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.02□□□□□ -2.25
POLR1AO95602 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.02□□□□□ -2.25
POLR1AO95602 AC005034.5-201ENST00000604219 466 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 HSPE1P7-201ENST00000604681 321 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 AC018755.4-201ENST00000619715 454 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 UCA1.1-201ENST00000620952 75 ntBASIC1.02□□□□□ -2.25
POLR1AO95602 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.02□□□□□ -2.25
POLR1AO95602 RNA5SP391-201ENST00000363456 119 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 RNU6-939P-201ENST00000384634 107 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 MIR320B1-201ENST00000390209 79 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 RNU2-21P-201ENST00000410368 188 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 HMGB3P31-201ENST00000413333 595 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 AL356320.2-201ENST00000417263 507 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.01□□□□□ -2.25
POLR1AO95602 Z80107.1-201ENST00000436830 412 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.01□□□□□ -2.25
POLR1AO95602 AC055731.1-201ENST00000474387 401 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.01□□□□□ -2.25
POLR1AO95602 MTND2P26-201ENST00000528255 1029 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.01□□□□□ -2.25
POLR1AO95602 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.01□□□□□ -2.25
POLR1AO95602 AL137003.2-201ENST00000606924 2538 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.01□□□□□ -2.25
POLR1AO95602 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.01□□□□□ -2.25
POLR1AO95602 RN7SKP61-201ENST00000410642 295 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 AC004383.1-201ENST00000438135 289 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 AC093770.1-201ENST00000511559 571 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 RNU6-351P-201ENST00000516097 100 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 AP003484.1-201ENST00000530974 250 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 AL713998.2-201ENST00000604538 1198 ntBASIC1.01□□□□□ -2.25
POLR1AO95602 CR848007.1-201ENST00000442354 1699 ntBASIC1□□□□□ -2.25
POLR1AO95602 AL645638.1-201ENST00000440519 361 ntBASIC1□□□□□ -2.25
POLR1AO95602 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1□□□□□ -2.25
POLR1AO95602 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1□□□□□ -2.25
POLR1AO95602 AC108157.1-201ENST00000510511 539 ntBASIC1□□□□□ -2.25
POLR1AO95602 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1□□□□□ -2.25
POLR1AO95602 AC040174.2-201ENST00000602701 465 ntBASIC1□□□□□ -2.25
POLR1AO95602 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1□□□□□ -2.25
POLR1AO95602 AC004808.1-201ENST00000627671 721 ntBASIC1□□□□□ -2.25
POLR1AO95602 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
POLR1AO95602 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
POLR1AO95602 Y_RNA.294-201ENST00000364916 102 ntBASIC0.99□□□□□ -2.25
POLR1AO95602 VTRNA1-3-201ENST00000365645 89 ntBASIC0.99□□□□□ -2.25
POLR1AO95602 MTND5P15-201ENST00000434246 349 ntBASIC0.99□□□□□ -2.25
POLR1AO95602 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.99□□□□□ -2.25
POLR1AO95602 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.99□□□□□ -2.25
POLR1AO95602 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.99□□□□□ -2.25
POLR1AO95602 KLF3P2-201ENST00000465138 268 ntBASIC0.99□□□□□ -2.25
POLR1AO95602 AC074029.2-201ENST00000551045 634 ntBASIC0.99□□□□□ -2.25
POLR1AO95602 MIR4529-201ENST00000578110 78 ntBASIC0.99□□□□□ -2.25
POLR1AO95602 AC092474.3-201ENST00000603022 568 ntBASIC0.99□□□□□ -2.25
POLR1AO95602 AL009028.1-201ENST00000604895 802 ntBASIC0.99□□□□□ -2.25
POLR1AO95602 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
POLR1AO95602 NACAP2-201ENST00000318548 624 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 MIR147B-201ENST00000390185 80 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 RNA5SP511-201ENST00000410487 115 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.98□□□□□ -2.25
POLR1AO95602 NDUFB4P2-201ENST00000509515 391 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.98□□□□□ -2.25
POLR1AO95602 AC025165.5-201ENST00000602802 578 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
POLR1AO95602 RPS15AP40-201ENST00000419621 391 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.98□□□□□ -2.25
POLR1AO95602 RPL23AP35-201ENST00000451906 501 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.98□□□□□ -2.25
POLR1AO95602 AC027575.1-201ENST00000481064 460 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 AC117454.1-201ENST00000491120 168 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 COL6A4P2-205ENST00000509855 506 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 RNU6-229P-201ENST00000516614 102 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 OR6C7P-201ENST00000547875 934 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms