Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC022483.1-201ENST00000514020 567 ntBASIC0.85□□□□□ -2.27
SIX6O95475 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.85□□□□□ -2.27
SIX6O95475 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.85□□□□□ -2.27
SIX6O95475 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.85□□□□□ -2.27
SIX6O95475 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.85□□□□□ -2.27
SIX6O95475 AC025918.2-201ENST00000558683 763 ntBASIC0.85□□□□□ -2.27
SIX6O95475 AC027104.1-201ENST00000563702 681 ntBASIC0.85□□□□□ -2.27
SIX6O95475 AC023825.1-201ENST00000566704 1030 ntBASIC0.85□□□□□ -2.27
SIX6O95475 MIR4303-201ENST00000581299 66 ntBASIC0.85□□□□□ -2.27
SIX6O95475 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SIX6O95475 AC026634.1-201ENST00000634369 198 ntBASIC0.85□□□□□ -2.27
SIX6O95475 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.85□□□□□ -2.27
SIX6O95475 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.84□□□□□ -2.27
SIX6O95475 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
SIX6O95475 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.84□□□□□ -2.27
SIX6O95475 RNU6-140P-201ENST00000384566 108 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.84□□□□□ -2.27
SIX6O95475 RPL23AP36-201ENST00000413895 458 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AC092634.2-201ENST00000428146 1010 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.84□□□□□ -2.27
SIX6O95475 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.84□□□□□ -2.27
SIX6O95475 AC241584.1-201ENST00000438469 1241 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.84□□□□□ -2.27
SIX6O95475 GDI2P2-201ENST00000445131 608 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.84□□□□□ -2.27
SIX6O95475 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.84□□□□□ -2.27
SIX6O95475 MTND2P24-201ENST00000453434 806 ntBASIC0.84□□□□□ -2.27
SIX6O95475 TRBV12-1-201ENST00000479785 344 ntBASIC0.84□□□□□ -2.27
SIX6O95475 CKS1BP2-201ENST00000497342 240 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.84□□□□□ -2.27
SIX6O95475 RNA5SP112-201ENST00000515937 99 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.84□□□□□ -2.27
SIX6O95475 HSPA8P13-201ENST00000523715 472 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AC104763.2-201ENST00000604179 382 ntBASIC0.84□□□□□ -2.27
SIX6O95475 FTX_3.1-201ENST00000610451 147 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AC092140.2-201ENST00000618027 521 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AL391597.1-201ENST00000618707 694 ntBASIC0.84□□□□□ -2.27
SIX6O95475 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.84□□□□□ -2.27
SIX6O95475 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.84□□□□□ -2.28
SIX6O95475 AL359854.1-201ENST00000614203 1594 ntBASIC0.83□□□□□ -2.28
SIX6O95475 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SIX6O95475 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.83□□□□□ -2.28
SIX6O95475 RNA5SP240-201ENST00000365355 128 ntBASIC0.83□□□□□ -2.28
SIX6O95475 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
SIX6O95475 RNU6-76P-201ENST00000384060 104 ntBASIC0.83□□□□□ -2.28
SIX6O95475 MIR634-201ENST00000385208 97 ntBASIC0.83□□□□□ -2.28
SIX6O95475 PIGPP2-201ENST00000411569 458 ntBASIC0.83□□□□□ -2.28
SIX6O95475 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.83□□□□□ -2.28
SIX6O95475 RPL21P90-201ENST00000415692 466 ntBASIC0.83□□□□□ -2.28
SIX6O95475 AL449283.1-202ENST00000418249 604 ntBASIC0.83□□□□□ -2.28
SIX6O95475 BPY2DP-201ENST00000422208 265 ntBASIC0.83□□□□□ -2.28
SIX6O95475 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.83□□□□□ -2.28
SIX6O95475 AC018630.2-202ENST00000422992 927 ntBASIC0.83□□□□□ -2.28
SIX6O95475 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.83□□□□□ -2.28
SIX6O95475 COX6CP18-201ENST00000448769 222 ntBASIC0.83□□□□□ -2.28
SIX6O95475 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.83□□□□□ -2.28
SIX6O95475 RPL36AP21-201ENST00000490372 323 ntBASIC0.83□□□□□ -2.28
SIX6O95475 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.83□□□□□ -2.28
SIX6O95475 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.83□□□□□ -2.28
SIX6O95475 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SIX6O95475 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.83□□□□□ -2.28
SIX6O95475 AL359212.1-201ENST00000556608 614 ntBASIC0.83□□□□□ -2.28
SIX6O95475 AL356432.3-201ENST00000568952 465 ntBASIC0.83□□□□□ -2.28
SIX6O95475 AC115989.2-201ENST00000578640 563 ntBASIC0.83□□□□□ -2.28
SIX6O95475 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.83□□□□□ -2.28
SIX6O95475 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.83□□□□□ -2.28
SIX6O95475 TUG1_1.1-201ENST00000610654 145 ntBASIC0.83□□□□□ -2.28
SIX6O95475 DUXAP10-204ENST00000612052 616 ntBASIC0.83□□□□□ -2.28
SIX6O95475 VN1R9P-201ENST00000614184 867 ntBASIC0.83□□□□□ -2.28
SIX6O95475 AL118508.4-201ENST00000624142 1176 ntBASIC0.83□□□□□ -2.28
SIX6O95475 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
SIX6O95475 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SIX6O95475 RNU6-152P-201ENST00000384037 107 ntBASIC0.82□□□□□ -2.28
SIX6O95475 RNU6-564P-201ENST00000410983 104 ntBASIC0.82□□□□□ -2.28
SIX6O95475 AL160275.3-201ENST00000423876 471 ntBASIC0.82□□□□□ -2.28
SIX6O95475 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.82□□□□□ -2.28
SIX6O95475 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.82□□□□□ -2.28
SIX6O95475 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.82□□□□□ -2.28
SIX6O95475 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.82□□□□□ -2.28
SIX6O95475 AL022238.1-201ENST00000442557 355 ntBASIC0.82□□□□□ -2.28
SIX6O95475 MTCO3P2-201ENST00000457365 171 ntBASIC0.82□□□□□ -2.28
SIX6O95475 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.82□□□□□ -2.28
SIX6O95475 AC116337.1-201ENST00000509680 687 ntBASIC0.82□□□□□ -2.28
SIX6O95475 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.82□□□□□ -2.28
SIX6O95475 RNU1-41P-201ENST00000516161 162 ntBASIC0.82□□□□□ -2.28
SIX6O95475 RNU1-48P-201ENST00000516400 162 ntBASIC0.82□□□□□ -2.28
SIX6O95475 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.82□□□□□ -2.28
SIX6O95475 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.82□□□□□ -2.28
SIX6O95475 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.82□□□□□ -2.28
SIX6O95475 AC026271.5-201ENST00000577873 130 ntBASIC0.82□□□□□ -2.28
SIX6O95475 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.82□□□□□ -2.28
SIX6O95475 MTCYBP22-201ENST00000603788 447 ntBASIC0.82□□□□□ -2.28
SIX6O95475 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.82□□□□□ -2.28
SIX6O95475 DUSP12P1-201ENST00000612874 516 ntBASIC0.82□□□□□ -2.28
SIX6O95475 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
SIX6O95475 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.82□□□□□ -2.28
SIX6O95475 MIR5739-201ENST00000619803 80 ntBASIC0.82□□□□□ -2.28
SIX6O95475 AC007490.1-201ENST00000624321 703 ntBASIC0.82□□□□□ -2.28
SIX6O95475 AL590396.2-201ENST00000636511 1041 ntBASIC0.82□□□□□ -2.28
SIX6O95475 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms