Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC106038.2-201ENST00000520706 568 ntBASIC2.59□□□□□ -1.99
SDC3O75056 AC022634.1-201ENST00000520765 532 ntBASIC2.59□□□□□ -1.99
SDC3O75056 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.59□□□□□ -1.99
SDC3O75056 ELOCP31-201ENST00000540463 467 ntBASIC2.59□□□□□ -1.99
SDC3O75056 GLYCAM1-201ENST00000546596 285 ntBASIC2.59□□□□□ -1.99
SDC3O75056 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.59□□□□□ -1.99
SDC3O75056 MIR5697-201ENST00000578045 78 ntBASIC2.59□□□□□ -1.99
SDC3O75056 MIR4635-201ENST00000583759 79 ntBASIC2.59□□□□□ -1.99
SDC3O75056 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.59□□□□□ -1.99
SDC3O75056 AL022161.1-201ENST00000604390 213 ntBASIC2.59□□□□□ -1.99
SDC3O75056 AC092354.1-201ENST00000606057 376 ntBASIC2.59□□□□□ -1.99
SDC3O75056 AC005046.1-201ENST00000608515 625 ntBASIC2.59□□□□□ -1.99
SDC3O75056 AC090115.4-201ENST00000609970 188 ntBASIC2.59□□□□□ -1.99
SDC3O75056 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.59□□□□□ -1.99
SDC3O75056 AC092140.2-201ENST00000618027 521 ntBASIC2.59□□□□□ -1.99
SDC3O75056 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.59□□□□□ -1.99
SDC3O75056 AC010338.1-201ENST00000621823 717 ntBASIC2.59□□□□□ -1.99
SDC3O75056 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.59□□□□□ -1.99
SDC3O75056 ASNSP3-201ENST00000451989 1306 ntBASIC2.59□□□□□ -2
SDC3O75056 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
SDC3O75056 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SDC3O75056 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.58□□□□□ -2
SDC3O75056 ELF2P3-201ENST00000445099 1506 ntBASIC2.58□□□□□ -2
SDC3O75056 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SDC3O75056 RNU6-533P-201ENST00000384144 107 ntBASIC2.58□□□□□ -2
SDC3O75056 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.58□□□□□ -2
SDC3O75056 AL139095.1-201ENST00000404326 391 ntBASIC2.58□□□□□ -2
SDC3O75056 Y_RNA.608-201ENST00000410647 95 ntBASIC2.58□□□□□ -2
SDC3O75056 HMGN2P35-201ENST00000412164 270 ntBASIC2.58□□□□□ -2
SDC3O75056 BX682237.1-201ENST00000415016 335 ntBASIC2.58□□□□□ -2
SDC3O75056 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.58□□□□□ -2
SDC3O75056 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
SDC3O75056 AC009963.1-201ENST00000417265 157 ntBASIC2.58□□□□□ -2
SDC3O75056 USP9YP13-201ENST00000417797 480 ntBASIC2.58□□□□□ -2
SDC3O75056 AC098614.2-201ENST00000426040 255 ntBASIC2.58□□□□□ -2
SDC3O75056 RPL36AP6-201ENST00000435770 321 ntBASIC2.58□□□□□ -2
SDC3O75056 RPL22P17-201ENST00000438729 315 ntBASIC2.58□□□□□ -2
SDC3O75056 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.58□□□□□ -2
SDC3O75056 EPS15P1-201ENST00000448836 336 ntBASIC2.58□□□□□ -2
SDC3O75056 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.58□□□□□ -2
SDC3O75056 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.58□□□□□ -2
SDC3O75056 AP000797.1-201ENST00000478870 387 ntBASIC2.58□□□□□ -2
SDC3O75056 AIG1P1-201ENST00000503376 148 ntBASIC2.58□□□□□ -2
SDC3O75056 RPF2P2-201ENST00000504693 896 ntBASIC2.58□□□□□ -2
SDC3O75056 ANXA2P1-201ENST00000505539 926 ntBASIC2.58□□□□□ -2
SDC3O75056 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.58□□□□□ -2
SDC3O75056 SNORA31.3-201ENST00000516029 96 ntBASIC2.58□□□□□ -2
SDC3O75056 RNU6-759P-201ENST00000516740 103 ntBASIC2.58□□□□□ -2
SDC3O75056 RPL7P20-201ENST00000520308 745 ntBASIC2.58□□□□□ -2
SDC3O75056 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.58□□□□□ -2
SDC3O75056 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.58□□□□□ -2
SDC3O75056 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.58□□□□□ -2
SDC3O75056 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.58□□□□□ -2
SDC3O75056 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.58□□□□□ -2
SDC3O75056 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.58□□□□□ -2
SDC3O75056 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.58□□□□□ -2
SDC3O75056 RPS3AP4-201ENST00000555161 764 ntBASIC2.58□□□□□ -2
SDC3O75056 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.58□□□□□ -2
SDC3O75056 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.58□□□□□ -2
SDC3O75056 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
SDC3O75056 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.58□□□□□ -2
SDC3O75056 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
SDC3O75056 OR1M4P-201ENST00000589199 287 ntBASIC2.58□□□□□ -2
SDC3O75056 AC121334.2-201ENST00000605387 271 ntBASIC2.58□□□□□ -2
SDC3O75056 AC138749.5-201ENST00000611461 208 ntBASIC2.58□□□□□ -2
SDC3O75056 AC087241.4-201ENST00000612441 480 ntBASIC2.58□□□□□ -2
SDC3O75056 AC116165.2-201ENST00000616705 206 ntBASIC2.58□□□□□ -2
SDC3O75056 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SDC3O75056 AF246928.1-201ENST00000623768 87 ntBASIC2.58□□□□□ -2
SDC3O75056 AC120349.3-201ENST00000624377 529 ntBASIC2.58□□□□□ -2
SDC3O75056 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SDC3O75056 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.58□□□□□ -2
SDC3O75056 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.58□□□□□ -2
SDC3O75056 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
SDC3O75056 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.57□□□□□ -2
SDC3O75056 Y_RNA.245-201ENST00000364493 95 ntBASIC2.57□□□□□ -2
SDC3O75056 RNY3P13-201ENST00000365542 102 ntBASIC2.57□□□□□ -2
SDC3O75056 Y_RNA.560-201ENST00000384689 102 ntBASIC2.57□□□□□ -2
SDC3O75056 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.57□□□□□ -2
SDC3O75056 MIR888-201ENST00000401186 77 ntBASIC2.57□□□□□ -2
SDC3O75056 AL139397.2-201ENST00000404529 772 ntBASIC2.57□□□□□ -2
SDC3O75056 ELOCP17-201ENST00000414751 326 ntBASIC2.57□□□□□ -2
SDC3O75056 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
SDC3O75056 NPM1P11-201ENST00000417106 855 ntBASIC2.57□□□□□ -2
SDC3O75056 MED14P1-201ENST00000430517 648 ntBASIC2.57□□□□□ -2
SDC3O75056 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.57□□□□□ -2
SDC3O75056 RPS29P6-201ENST00000438196 145 ntBASIC2.57□□□□□ -2
SDC3O75056 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.57□□□□□ -2
SDC3O75056 AL445567.1-201ENST00000439121 144 ntBASIC2.57□□□□□ -2
SDC3O75056 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.57□□□□□ -2
SDC3O75056 DPPA3P1-201ENST00000448050 469 ntBASIC2.57□□□□□ -2
SDC3O75056 AL590365.1-201ENST00000450788 243 ntBASIC2.57□□□□□ -2
SDC3O75056 MTND1P12-201ENST00000455231 147 ntBASIC2.57□□□□□ -2
SDC3O75056 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.57□□□□□ -2
SDC3O75056 AC128713.1-201ENST00000471495 306 ntBASIC2.57□□□□□ -2
SDC3O75056 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.57□□□□□ -2
SDC3O75056 AC107934.1-201ENST00000522215 217 ntBASIC2.57□□□□□ -2
SDC3O75056 COX6CP5-201ENST00000527162 228 ntBASIC2.57□□□□□ -2
SDC3O75056 AL512310.1-201ENST00000548639 172 ntBASIC2.57□□□□□ -2
SDC3O75056 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms