Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.56□□□□□ -2
LCMT2O60294 HMGN1P30-201ENST00000589286 268 ntBASIC2.56□□□□□ -2
LCMT2O60294 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
LCMT2O60294 AC112191.3-201ENST00000604371 277 ntBASIC2.56□□□□□ -2
LCMT2O60294 AC239868.4-201ENST00000608318 671 ntBASIC2.56□□□□□ -2
LCMT2O60294 AC012360.2-201ENST00000609349 391 ntBASIC2.56□□□□□ -2
LCMT2O60294 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.56□□□□□ -2
LCMT2O60294 SCARNA15.3-201ENST00000626315 122 ntBASIC2.56□□□□□ -2
LCMT2O60294 SCARNA4.1-201ENST00000628597 123 ntBASIC2.56□□□□□ -2
LCMT2O60294 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.56□□□□□ -2
LCMT2O60294 AC099654.13-201ENST00000639774 207 ntBASIC2.56□□□□□ -2
LCMT2O60294 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCMT2O60294 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCMT2O60294 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.56□□□□□ -2
LCMT2O60294 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.56□□□□□ -2
LCMT2O60294 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
LCMT2O60294 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.55□□□□□ -2
LCMT2O60294 Y_RNA.111-201ENST00000363248 100 ntBASIC2.55□□□□□ -2
LCMT2O60294 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LCMT2O60294 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.55□□□□□ -2
LCMT2O60294 RNY3P9-201ENST00000384727 106 ntBASIC2.55□□□□□ -2
LCMT2O60294 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.55□□□□□ -2
LCMT2O60294 HMGN2P35-201ENST00000412164 270 ntBASIC2.55□□□□□ -2
LCMT2O60294 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.55□□□□□ -2
LCMT2O60294 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.55□□□□□ -2
LCMT2O60294 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.55□□□□□ -2
LCMT2O60294 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.55□□□□□ -2
LCMT2O60294 AC244035.1-201ENST00000430042 390 ntBASIC2.55□□□□□ -2
LCMT2O60294 AC010153.1-201ENST00000432862 727 ntBASIC2.55□□□□□ -2
LCMT2O60294 MTND1P28-201ENST00000435623 950 ntBASIC2.55□□□□□ -2
LCMT2O60294 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.55□□□□□ -2
LCMT2O60294 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.55□□□□□ -2
LCMT2O60294 TAF9P1-201ENST00000445421 515 ntBASIC2.55□□□□□ -2
LCMT2O60294 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.55□□□□□ -2
LCMT2O60294 DPPA3P1-201ENST00000448050 469 ntBASIC2.55□□□□□ -2
LCMT2O60294 TAF9P2-201ENST00000454958 515 ntBASIC2.55□□□□□ -2
LCMT2O60294 SNORD109B-201ENST00000458961 67 ntBASIC2.55□□□□□ -2
LCMT2O60294 SNORD109A-201ENST00000459128 67 ntBASIC2.55□□□□□ -2
LCMT2O60294 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.55□□□□□ -2
LCMT2O60294 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.55□□□□□ -2
LCMT2O60294 AC092104.1-201ENST00000497346 1441 ntBASIC2.55□□□□□ -2
LCMT2O60294 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.55□□□□□ -2
LCMT2O60294 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.55□□□□□ -2
LCMT2O60294 RPPH1-2P-201ENST00000516688 293 ntBASIC2.55□□□□□ -2
LCMT2O60294 SUB1P1-201ENST00000524415 382 ntBASIC2.55□□□□□ -2
LCMT2O60294 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
LCMT2O60294 AC022878.1-201ENST00000530684 149 ntBASIC2.55□□□□□ -2
LCMT2O60294 AC093012.1-202ENST00000549403 582 ntBASIC2.55□□□□□ -2
LCMT2O60294 ARL2BPP2-201ENST00000550907 489 ntBASIC2.55□□□□□ -2
LCMT2O60294 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.55□□□□□ -2
LCMT2O60294 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.55□□□□□ -2
LCMT2O60294 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.55□□□□□ -2
LCMT2O60294 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.55□□□□□ -2
LCMT2O60294 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.55□□□□□ -2
LCMT2O60294 AC103710.2-201ENST00000609912 942 ntBASIC2.55□□□□□ -2
LCMT2O60294 FTX_3.1-201ENST00000610451 147 ntBASIC2.55□□□□□ -2
LCMT2O60294 AC008498.1-201ENST00000613012 531 ntBASIC2.55□□□□□ -2
LCMT2O60294 uc_338.12-201ENST00000616344 181 ntBASIC2.55□□□□□ -2
LCMT2O60294 AC006338.1-201ENST00000618453 749 ntBASIC2.55□□□□□ -2
LCMT2O60294 AC009878.1-201ENST00000621819 340 ntBASIC2.55□□□□□ -2
LCMT2O60294 MIR3974-201ENST00000637126 96 ntBASIC2.55□□□□□ -2
LCMT2O60294 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
LCMT2O60294 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.54□□□□□ -2
LCMT2O60294 RNU6-884P-201ENST00000363889 107 ntBASIC2.54□□□□□ -2
LCMT2O60294 RNU4-1-201ENST00000363925 141 ntBASIC2.54□□□□□ -2
LCMT2O60294 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LCMT2O60294 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LCMT2O60294 AL139095.1-201ENST00000404326 391 ntBASIC2.54□□□□□ -2
LCMT2O60294 ELOCP17-201ENST00000414751 326 ntBASIC2.54□□□□□ -2
LCMT2O60294 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.54□□□□□ -2
LCMT2O60294 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.54□□□□□ -2
LCMT2O60294 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.54□□□□□ -2
LCMT2O60294 MRPL50P4-201ENST00000446432 475 ntBASIC2.54□□□□□ -2
LCMT2O60294 SSXP1-201ENST00000453640 473 ntBASIC2.54□□□□□ -2
LCMT2O60294 AP000705.1-201ENST00000454567 350 ntBASIC2.54□□□□□ -2
LCMT2O60294 RPS29P20-201ENST00000489592 171 ntBASIC2.54□□□□□ -2
LCMT2O60294 AC010486.3-201ENST00000511602 785 ntBASIC2.54□□□□□ -2
LCMT2O60294 RNA5SP356-201ENST00000515972 94 ntBASIC2.54□□□□□ -2
LCMT2O60294 AC022634.1-201ENST00000520765 532 ntBASIC2.54□□□□□ -2
LCMT2O60294 COX6CP5-201ENST00000527162 228 ntBASIC2.54□□□□□ -2
LCMT2O60294 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.54□□□□□ -2
LCMT2O60294 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.54□□□□□ -2
LCMT2O60294 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
LCMT2O60294 MIR4635-201ENST00000583759 79 ntBASIC2.54□□□□□ -2
LCMT2O60294 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
LCMT2O60294 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
LCMT2O60294 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.54□□□□□ -2
LCMT2O60294 CLIC4P2-201ENST00000601934 717 ntBASIC2.54□□□□□ -2
LCMT2O60294 AC136601.2-201ENST00000604356 474 ntBASIC2.54□□□□□ -2
LCMT2O60294 AC121334.2-201ENST00000605387 271 ntBASIC2.54□□□□□ -2
LCMT2O60294 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.54□□□□□ -2
LCMT2O60294 AC007619.2-201ENST00000605743 379 ntBASIC2.54□□□□□ -2
LCMT2O60294 OR2AS2P-201ENST00000606902 342 ntBASIC2.54□□□□□ -2
LCMT2O60294 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.54□□□□□ -2
LCMT2O60294 AC103710.1-201ENST00000610003 901 ntBASIC2.54□□□□□ -2
LCMT2O60294 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
LCMT2O60294 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LCMT2O60294 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.53□□□□□ -2
LCMT2O60294 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.53□□□□□ -2
LCMT2O60294 U3.4-201ENST00000363352 213 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms