Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL035407.1-201ENST00000429211 571 ntBASIC1.79□□□□□ -2.12
SGCEO43556 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.79□□□□□ -2.12
SGCEO43556 RPL37P6-201ENST00000460682 294 ntBASIC1.79□□□□□ -2.12
SGCEO43556 RPL23AP41-201ENST00000484754 458 ntBASIC1.79□□□□□ -2.12
SGCEO43556 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.79□□□□□ -2.12
SGCEO43556 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SGCEO43556 RPS15AP36-201ENST00000492022 382 ntBASIC1.79□□□□□ -2.12
SGCEO43556 RPL9P6-201ENST00000492764 598 ntBASIC1.79□□□□□ -2.12
SGCEO43556 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.79□□□□□ -2.12
SGCEO43556 AC008628.1-201ENST00000508663 265 ntBASIC1.79□□□□□ -2.12
SGCEO43556 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.79□□□□□ -2.12
SGCEO43556 AC008549.1-201ENST00000512900 643 ntBASIC1.79□□□□□ -2.12
SGCEO43556 RNU6-390P-201ENST00000516259 103 ntBASIC1.79□□□□□ -2.12
SGCEO43556 AP003355.1-201ENST00000518956 587 ntBASIC1.79□□□□□ -2.12
SGCEO43556 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.79□□□□□ -2.12
SGCEO43556 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.79□□□□□ -2.12
SGCEO43556 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SGCEO43556 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.79□□□□□ -2.12
SGCEO43556 MTATP6P2-201ENST00000603319 678 ntBASIC1.79□□□□□ -2.12
SGCEO43556 AC099785.1-201ENST00000605697 437 ntBASIC1.79□□□□□ -2.12
SGCEO43556 AL512506.1-201ENST00000613918 449 ntBASIC1.79□□□□□ -2.12
SGCEO43556 MIR5739-201ENST00000619803 80 ntBASIC1.79□□□□□ -2.12
SGCEO43556 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.79□□□□□ -2.12
SGCEO43556 AC244517.12-201ENST00000623581 663 ntBASIC1.79□□□□□ -2.12
SGCEO43556 MIR219B-201ENST00000637023 88 ntBASIC1.79□□□□□ -2.12
SGCEO43556 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.79□□□□□ -2.12
SGCEO43556 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.79□□□□□ -2.12
SGCEO43556 AC008555.8-201ENST00000623602 2168 ntBASIC1.79□□□□□ -2.12
SGCEO43556 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SGCEO43556 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SGCEO43556 RNU6-1159P-201ENST00000362933 107 ntBASIC1.78□□□□□ -2.12
SGCEO43556 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SGCEO43556 SNORA64-201ENST00000384674 134 ntBASIC1.78□□□□□ -2.12
SGCEO43556 RSL24D1P4-201ENST00000400938 484 ntBASIC1.78□□□□□ -2.12
SGCEO43556 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.78□□□□□ -2.12
SGCEO43556 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.78□□□□□ -2.12
SGCEO43556 USP9YP26-201ENST00000421008 661 ntBASIC1.78□□□□□ -2.12
SGCEO43556 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.78□□□□□ -2.12
SGCEO43556 AL353729.1-201ENST00000425044 720 ntBASIC1.78□□□□□ -2.12
SGCEO43556 PTGES3P4-201ENST00000426243 356 ntBASIC1.78□□□□□ -2.12
SGCEO43556 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.78□□□□□ -2.12
SGCEO43556 AL139415.2-201ENST00000431968 163 ntBASIC1.78□□□□□ -2.12
SGCEO43556 AL451074.3-201ENST00000437709 472 ntBASIC1.78□□□□□ -2.12
SGCEO43556 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.78□□□□□ -2.12
SGCEO43556 AC020550.1-201ENST00000447385 163 ntBASIC1.78□□□□□ -2.12
SGCEO43556 MTCO1P42-201ENST00000457379 726 ntBASIC1.78□□□□□ -2.12
SGCEO43556 PMCHL2-203ENST00000457791 237 ntBASIC1.78□□□□□ -2.12
SGCEO43556 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.78□□□□□ -2.12
SGCEO43556 CKS1BP2-201ENST00000497342 240 ntBASIC1.78□□□□□ -2.12
SGCEO43556 MRPS17P9-201ENST00000511924 393 ntBASIC1.78□□□□□ -2.12
SGCEO43556 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.78□□□□□ -2.12
SGCEO43556 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
SGCEO43556 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.78□□□□□ -2.12
SGCEO43556 AL109918.3-201ENST00000603072 338 ntBASIC1.78□□□□□ -2.12
SGCEO43556 AL355297.2-201ENST00000604792 129 ntBASIC1.78□□□□□ -2.12
SGCEO43556 AL356266.1-201ENST00000623311 483 ntBASIC1.78□□□□□ -2.12
SGCEO43556 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.77□□□□□ -2.13
SGCEO43556 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SGCEO43556 AL023284.1-201ENST00000403956 276 ntBASIC1.77□□□□□ -2.13
SGCEO43556 TIMM9P2-201ENST00000419324 266 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AC027124.2-201ENST00000428249 105 ntBASIC1.77□□□□□ -2.13
SGCEO43556 GPM6BP2-201ENST00000432046 144 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AC010153.1-201ENST00000432862 727 ntBASIC1.77□□□□□ -2.13
SGCEO43556 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.77□□□□□ -2.13
SGCEO43556 USP9YP8-201ENST00000441913 500 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AC009238.1-201ENST00000442165 424 ntBASIC1.77□□□□□ -2.13
SGCEO43556 FAM103A2P-201ENST00000444122 354 ntBASIC1.77□□□□□ -2.13
SGCEO43556 GPM6BP1-201ENST00000446387 144 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AC009237.6-201ENST00000446969 424 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.77□□□□□ -2.13
SGCEO43556 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.77□□□□□ -2.13
SGCEO43556 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.77□□□□□ -2.13
SGCEO43556 CYP2C59P-201ENST00000457790 269 ntBASIC1.77□□□□□ -2.13
SGCEO43556 SNORA59A-201ENST00000459326 152 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AC005410.1-202ENST00000460347 485 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AP001324.2-201ENST00000461163 319 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AC069528.1-202ENST00000482888 637 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.77□□□□□ -2.13
SGCEO43556 HMGB3P17-201ENST00000504195 649 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.77□□□□□ -2.13
SGCEO43556 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.77□□□□□ -2.13
SGCEO43556 IGKV3-31-201ENST00000523109 329 ntBASIC1.77□□□□□ -2.13
SGCEO43556 AL121821.2-201ENST00000556081 394 ntBASIC1.77□□□□□ -2.13
SGCEO43556 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.77□□□□□ -2.13
SGCEO43556 NRBF2P1-201ENST00000587407 859 ntBASIC1.77□□□□□ -2.13
SGCEO43556 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.77□□□□□ -2.13
SGCEO43556 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SGCEO43556 snoZ40.1-201ENST00000364540 72 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.76□□□□□ -2.13
SGCEO43556 SNORA67.3-201ENST00000384366 140 ntBASIC1.76□□□□□ -2.13
SGCEO43556 RN7SKP192-201ENST00000411291 327 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.76□□□□□ -2.13
SGCEO43556 AL139156.1-201ENST00000412785 841 ntBASIC1.76□□□□□ -2.13
SGCEO43556 USP9YP6-201ENST00000413550 854 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.76□□□□□ -2.13
SGCEO43556 RPL31P63-201ENST00000422565 375 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AL136380.1-201ENST00000447970 162 ntBASIC1.76□□□□□ -2.13
SGCEO43556 MTND1P31-201ENST00000449206 961 ntBASIC1.76□□□□□ -2.13
SGCEO43556 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.76□□□□□ -2.13
SGCEO43556 AC008481.1-201ENST00000463278 396 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms