Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.46□□□□□ -1.86
MSI1O43347 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.46□□□□□ -1.86
MSI1O43347 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MSI1O43347 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.46□□□□□ -1.86
MSI1O43347 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.46□□□□□ -1.86
MSI1O43347 AC010525.2-201ENST00000590920 195 ntBASIC3.46□□□□□ -1.86
MSI1O43347 AC006504.8-201ENST00000621046 635 ntBASIC3.46□□□□□ -1.86
MSI1O43347 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.46□□□□□ -1.86
MSI1O43347 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.46□□□□□ -1.86
MSI1O43347 API5P2-201ENST00000397055 1498 ntBASIC3.46□□□□□ -1.86
MSI1O43347 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
MSI1O43347 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MSI1O43347 ASNSP3-201ENST00000451989 1306 ntBASIC3.45□□□□□ -1.86
MSI1O43347 Z83843.1-201ENST00000604070 3685 ntBASIC3.45□□□□□ -1.86
MSI1O43347 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 RNU5A-1-201ENST00000362698 116 ntBASIC3.45□□□□□ -1.86
MSI1O43347 RNU4-20P-201ENST00000365601 151 ntBASIC3.45□□□□□ -1.86
MSI1O43347 MIR607-201ENST00000385241 96 ntBASIC3.45□□□□□ -1.86
MSI1O43347 RNA5SP120-201ENST00000410900 112 ntBASIC3.45□□□□□ -1.86
MSI1O43347 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.45□□□□□ -1.86
MSI1O43347 AL451054.2-201ENST00000420896 202 ntBASIC3.45□□□□□ -1.86
MSI1O43347 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.45□□□□□ -1.86
MSI1O43347 RPL23AP82-202ENST00000427528 469 ntBASIC3.45□□□□□ -1.86
MSI1O43347 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.45□□□□□ -1.86
MSI1O43347 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.45□□□□□ -1.86
MSI1O43347 MTND4P25-201ENST00000441039 533 ntBASIC3.45□□□□□ -1.86
MSI1O43347 NEFMP1-201ENST00000443423 1006 ntBASIC3.45□□□□□ -1.86
MSI1O43347 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.45□□□□□ -1.86
MSI1O43347 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.45□□□□□ -1.86
MSI1O43347 MTND1P18-201ENST00000448191 573 ntBASIC3.45□□□□□ -1.86
MSI1O43347 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.45□□□□□ -1.86
MSI1O43347 CENPBD1P1-201ENST00000464061 469 ntBASIC3.45□□□□□ -1.86
MSI1O43347 RPL31P13-201ENST00000484151 370 ntBASIC3.45□□□□□ -1.86
MSI1O43347 RPL39P36-201ENST00000490784 156 ntBASIC3.45□□□□□ -1.86
MSI1O43347 MTCO2P30-201ENST00000503662 364 ntBASIC3.45□□□□□ -1.86
MSI1O43347 RBBP4P6-201ENST00000508098 202 ntBASIC3.45□□□□□ -1.86
MSI1O43347 AC098799.2-201ENST00000509466 868 ntBASIC3.45□□□□□ -1.86
MSI1O43347 SNORA31.3-201ENST00000516029 96 ntBASIC3.45□□□□□ -1.86
MSI1O43347 SNORD60.2-201ENST00000516883 86 ntBASIC3.45□□□□□ -1.86
MSI1O43347 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.45□□□□□ -1.86
MSI1O43347 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.45□□□□□ -1.86
MSI1O43347 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.45□□□□□ -1.86
MSI1O43347 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.45□□□□□ -1.86
MSI1O43347 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 MIR7112-201ENST00000616126 65 ntBASIC3.45□□□□□ -1.86
MSI1O43347 AP003122.6-201ENST00000623831 495 ntBASIC3.45□□□□□ -1.86
MSI1O43347 AC009033.1-201ENST00000624279 431 ntBASIC3.45□□□□□ -1.86
MSI1O43347 USP8P1-201ENST00000494673 3183 ntBASIC3.45□□□□□ -1.86
MSI1O43347 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.45□□□□□ -1.86
MSI1O43347 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
MSI1O43347 OR4G2P-202ENST00000641004 1759 ntBASIC3.44□□□□□ -1.86
MSI1O43347 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MSI1O43347 NACAP2-201ENST00000318548 624 ntBASIC3.44□□□□□ -1.86
MSI1O43347 MIR30E-201ENST00000362104 92 ntBASIC3.44□□□□□ -1.86
MSI1O43347 RNU6-600P-201ENST00000362524 99 ntBASIC3.44□□□□□ -1.86
MSI1O43347 Y_RNA.160-201ENST00000363677 92 ntBASIC3.44□□□□□ -1.86
MSI1O43347 MIR514A1-201ENST00000385133 98 ntBASIC3.44□□□□□ -1.86
MSI1O43347 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
MSI1O43347 AL357075.1-201ENST00000404107 726 ntBASIC3.44□□□□□ -1.86
MSI1O43347 AL139397.2-201ENST00000404529 772 ntBASIC3.44□□□□□ -1.86
MSI1O43347 RN7SKP140-201ENST00000411196 284 ntBASIC3.44□□□□□ -1.86
MSI1O43347 AC092809.3-201ENST00000415453 231 ntBASIC3.44□□□□□ -1.86
MSI1O43347 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.44□□□□□ -1.86
MSI1O43347 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.44□□□□□ -1.86
MSI1O43347 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.44□□□□□ -1.86
MSI1O43347 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.44□□□□□ -1.86
MSI1O43347 AL121601.2-201ENST00000438019 707 ntBASIC3.44□□□□□ -1.86
MSI1O43347 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.44□□□□□ -1.86
MSI1O43347 Z75741.1-201ENST00000446793 314 ntBASIC3.44□□□□□ -1.86
MSI1O43347 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.44□□□□□ -1.86
MSI1O43347 MTND3P10-201ENST00000450967 341 ntBASIC3.44□□□□□ -1.86
MSI1O43347 RPS20P20-201ENST00000460498 340 ntBASIC3.44□□□□□ -1.86
MSI1O43347 AC010401.1-201ENST00000463867 348 ntBASIC3.44□□□□□ -1.86
MSI1O43347 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.44□□□□□ -1.86
MSI1O43347 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.44□□□□□ -1.86
MSI1O43347 AL355836.1-201ENST00000555951 870 ntBASIC3.44□□□□□ -1.86
MSI1O43347 AC015917.1-201ENST00000579654 510 ntBASIC3.44□□□□□ -1.86
MSI1O43347 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.44□□□□□ -1.86
MSI1O43347 AC005730.3-201ENST00000583067 366 ntBASIC3.44□□□□□ -1.86
MSI1O43347 MIR5195-201ENST00000583555 115 ntBASIC3.44□□□□□ -1.86
MSI1O43347 AC008521.1-201ENST00000587471 187 ntBASIC3.44□□□□□ -1.86
MSI1O43347 BDH2P1-201ENST00000602288 736 ntBASIC3.44□□□□□ -1.86
MSI1O43347 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.44□□□□□ -1.86
MSI1O43347 AC007998.5-201ENST00000622938 237 ntBASIC3.44□□□□□ -1.86
MSI1O43347 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.44□□□□□ -1.86
MSI1O43347 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
MSI1O43347 SDAD1P2-201ENST00000441308 2028 ntBASIC3.44□□□□□ -1.86
MSI1O43347 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.44□□□□□ -1.86
MSI1O43347 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
MSI1O43347 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MSI1O43347 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MSI1O43347 DEFB108F-201ENST00000344638 222 ntBASIC3.43□□□□□ -1.86
MSI1O43347 Y_RNA.86-201ENST00000363020 111 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms