Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.17□□□□□ -2.06
LSM1O15116 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.17□□□□□ -2.06
LSM1O15116 BTF3L4P3-201ENST00000418879 476 ntBASIC2.17□□□□□ -2.06
LSM1O15116 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.17□□□□□ -2.06
LSM1O15116 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM1O15116 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.17□□□□□ -2.06
LSM1O15116 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM1O15116 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM1O15116 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.17□□□□□ -2.06
LSM1O15116 RNU7-59P-201ENST00000459101 61 ntBASIC2.17□□□□□ -2.06
LSM1O15116 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
LSM1O15116 AC004263.1-201ENST00000479327 332 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AC008526.1-201ENST00000509149 338 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM1O15116 AC118465.1-201ENST00000513820 1271 ntBASIC2.17□□□□□ -2.06
LSM1O15116 RNA5SP216-201ENST00000516111 123 ntBASIC2.17□□□□□ -2.06
LSM1O15116 RNU6-390P-201ENST00000516259 103 ntBASIC2.17□□□□□ -2.06
LSM1O15116 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
LSM1O15116 RNA5SP364-201ENST00000516938 78 ntBASIC2.17□□□□□ -2.06
LSM1O15116 ROCK1P1-201ENST00000573767 549 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM1O15116 AC008749.1-201ENST00000597650 306 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AL355598.1-201ENST00000604169 202 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AC112220.3-201ENST00000605502 502 ntBASIC2.17□□□□□ -2.06
LSM1O15116 uc_338.14-201ENST00000613162 166 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AL161423.1-201ENST00000613700 262 ntBASIC2.17□□□□□ -2.06
LSM1O15116 uc_338.20-201ENST00000621563 178 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AP002791.1-201ENST00000623291 381 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.17□□□□□ -2.06
LSM1O15116 AP003400.5-201ENST00000624827 617 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AC013437.2-201ENST00000639587 677 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AC104454.1-201ENST00000421341 1401 ntBASIC2.17□□□□□ -2.06
LSM1O15116 AL354685.2-201ENST00000448218 1447 ntBASIC2.17□□□□□ -2.06
LSM1O15116 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LSM1O15116 RNU6-525P-201ENST00000363685 104 ntBASIC2.16□□□□□ -2.06
LSM1O15116 U3.12-201ENST00000364498 214 ntBASIC2.16□□□□□ -2.06
LSM1O15116 Y_RNA.465-201ENST00000384293 102 ntBASIC2.16□□□□□ -2.06
LSM1O15116 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AL030996.1-201ENST00000411430 235 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AL359704.1-201ENST00000411586 781 ntBASIC2.16□□□□□ -2.06
LSM1O15116 VN1R51P-201ENST00000411675 945 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AL353729.1-201ENST00000425044 720 ntBASIC2.16□□□□□ -2.06
LSM1O15116 RPS3AP44-201ENST00000425466 790 ntBASIC2.16□□□□□ -2.06
LSM1O15116 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.16□□□□□ -2.06
LSM1O15116 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.16□□□□□ -2.06
LSM1O15116 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
LSM1O15116 RN7SL636P-201ENST00000497504 294 ntBASIC2.16□□□□□ -2.06
LSM1O15116 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LSM1O15116 RPF2P2-201ENST00000504693 896 ntBASIC2.16□□□□□ -2.06
LSM1O15116 YWHAZP1-201ENST00000556286 722 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AC023813.2-201ENST00000564321 469 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.16□□□□□ -2.06
LSM1O15116 AC007038.2-201ENST00000608095 740 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AC069294.1-201ENST00000608397 350 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AC018645.2-201ENST00000609151 472 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AL162373.1-201ENST00000620433 407 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AC112204.3-201ENST00000623822 332 ntBASIC2.16□□□□□ -2.06
LSM1O15116 AC091932.3-201ENST00000624223 323 ntBASIC2.16□□□□□ -2.06
LSM1O15116 CTSLP2-204ENST00000629029 392 ntBASIC2.16□□□□□ -2.06
LSM1O15116 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.16□□□□□ -2.06
LSM1O15116 MTND5P30-201ENST00000452896 1731 ntBASIC2.16□□□□□ -2.06
LSM1O15116 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.16□□□□□ -2.06
LSM1O15116 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
LSM1O15116 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
LSM1O15116 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LSM1O15116 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LSM1O15116 AL021407.1-201ENST00000404531 386 ntBASIC2.15□□□□□ -2.07
LSM1O15116 MIR320C1-201ENST00000408566 88 ntBASIC2.15□□□□□ -2.07
LSM1O15116 HMGB1P11-201ENST00000413899 637 ntBASIC2.15□□□□□ -2.07
LSM1O15116 AC083875.1-201ENST00000419509 405 ntBASIC2.15□□□□□ -2.07
LSM1O15116 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.15□□□□□ -2.07
LSM1O15116 AL161651.1-201ENST00000440882 223 ntBASIC2.15□□□□□ -2.07
LSM1O15116 AC016691.1-201ENST00000441321 413 ntBASIC2.15□□□□□ -2.07
LSM1O15116 FAM103A2P-201ENST00000444122 354 ntBASIC2.15□□□□□ -2.07
LSM1O15116 AC068781.1-201ENST00000488231 618 ntBASIC2.15□□□□□ -2.07
LSM1O15116 AC055855.1-201ENST00000489563 579 ntBASIC2.15□□□□□ -2.07
LSM1O15116 GZMAP1-201ENST00000503054 631 ntBASIC2.15□□□□□ -2.07
LSM1O15116 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.15□□□□□ -2.07
LSM1O15116 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.15□□□□□ -2.07
LSM1O15116 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.15□□□□□ -2.07
LSM1O15116 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.15□□□□□ -2.07
LSM1O15116 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.15□□□□□ -2.07
LSM1O15116 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.15□□□□□ -2.07
LSM1O15116 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.15□□□□□ -2.07
LSM1O15116 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.15□□□□□ -2.07
LSM1O15116 MIR3162-201ENST00000581818 82 ntBASIC2.15□□□□□ -2.07
LSM1O15116 AC105245.1-201ENST00000581934 244 ntBASIC2.15□□□□□ -2.07
LSM1O15116 NRBF2P1-201ENST00000587407 859 ntBASIC2.15□□□□□ -2.07
LSM1O15116 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.15□□□□□ -2.07
LSM1O15116 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.15□□□□□ -2.07
LSM1O15116 AC011939.3-201ENST00000613686 466 ntBASIC2.15□□□□□ -2.07
LSM1O15116 AC009831.4-201ENST00000620744 325 ntBASIC2.15□□□□□ -2.07
LSM1O15116 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LSM1O15116 PISRT1-201ENST00000626175 531 ntBASIC2.15□□□□□ -2.07
LSM1O15116 AC025048.6-202ENST00000627667 438 ntBASIC2.15□□□□□ -2.07
LSM1O15116 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LSM1O15116 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LSM1O15116 AP000776.1-201ENST00000530032 1663 ntBASIC2.15□□□□□ -2.07
LSM1O15116 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
LSM1O15116 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms