Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU2-66P-201ENST00000410650 161 ntBASIC2.57□□□□□ -2
CDX4O14627 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.57□□□□□ -2
CDX4O14627 RPL7P10-201ENST00000417407 739 ntBASIC2.57□□□□□ -2
CDX4O14627 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.57□□□□□ -2
CDX4O14627 RPS3AP44-201ENST00000425466 790 ntBASIC2.57□□□□□ -2
CDX4O14627 AC104651.1-201ENST00000427559 735 ntBASIC2.57□□□□□ -2
CDX4O14627 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.57□□□□□ -2
CDX4O14627 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.57□□□□□ -2
CDX4O14627 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX4O14627 USP9YP12-201ENST00000450481 570 ntBASIC2.57□□□□□ -2
CDX4O14627 AL590365.1-201ENST00000450788 243 ntBASIC2.57□□□□□ -2
CDX4O14627 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.57□□□□□ -2
CDX4O14627 AC108059.3-201ENST00000456388 214 ntBASIC2.57□□□□□ -2
CDX4O14627 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX4O14627 AC135721.1-201ENST00000497954 479 ntBASIC2.57□□□□□ -2
CDX4O14627 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.57□□□□□ -2
CDX4O14627 AC109464.2-201ENST00000510242 943 ntBASIC2.57□□□□□ -2
CDX4O14627 CDC42P4-201ENST00000510507 563 ntBASIC2.57□□□□□ -2
CDX4O14627 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.57□□□□□ -2
CDX4O14627 AL117351.2-201ENST00000513571 157 ntBASIC2.57□□□□□ -2
CDX4O14627 SNORA31.1-201ENST00000515993 133 ntBASIC2.57□□□□□ -2
CDX4O14627 SNORA31.5-201ENST00000516190 133 ntBASIC2.57□□□□□ -2
CDX4O14627 RNA5SP320-201ENST00000516263 124 ntBASIC2.57□□□□□ -2
CDX4O14627 SNORA31.22-201ENST00000517204 135 ntBASIC2.57□□□□□ -2
CDX4O14627 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.57□□□□□ -2
CDX4O14627 AP000857.1-201ENST00000532151 543 ntBASIC2.57□□□□□ -2
CDX4O14627 AP002453.2-201ENST00000533503 320 ntBASIC2.57□□□□□ -2
CDX4O14627 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.57□□□□□ -2
CDX4O14627 AC245505.1-201ENST00000556398 224 ntBASIC2.57□□□□□ -2
CDX4O14627 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.57□□□□□ -2
CDX4O14627 AC010546.1-201ENST00000569391 485 ntBASIC2.57□□□□□ -2
CDX4O14627 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.57□□□□□ -2
CDX4O14627 AC091805.2-201ENST00000603848 235 ntBASIC2.57□□□□□ -2
CDX4O14627 AC008277.2-201ENST00000605196 797 ntBASIC2.57□□□□□ -2
CDX4O14627 AC025754.2-201ENST00000606491 432 ntBASIC2.57□□□□□ -2
CDX4O14627 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.57□□□□□ -2
CDX4O14627 AC007038.2-201ENST00000608095 740 ntBASIC2.57□□□□□ -2
CDX4O14627 AC107294.3-201ENST00000609211 526 ntBASIC2.57□□□□□ -2
CDX4O14627 AC090115.4-201ENST00000609970 188 ntBASIC2.57□□□□□ -2
CDX4O14627 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.57□□□□□ -2
CDX4O14627 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX4O14627 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CDX4O14627 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CDX4O14627 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX4O14627 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX4O14627 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CDX4O14627 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDX4O14627 AC110774.1-201ENST00000623567 2018 ntBASIC2.56□□□□□ -2
CDX4O14627 AL138713.1-201ENST00000624026 2130 ntBASIC2.56□□□□□ -2
CDX4O14627 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDX4O14627 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDX4O14627 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.56□□□□□ -2
CDX4O14627 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
CDX4O14627 SNORD62.1-201ENST00000362541 86 ntBASIC2.56□□□□□ -2
CDX4O14627 U3.6-201ENST00000363622 211 ntBASIC2.56□□□□□ -2
CDX4O14627 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDX4O14627 RNU6-533P-201ENST00000384144 107 ntBASIC2.56□□□□□ -2
CDX4O14627 RNU6-1215P-201ENST00000384441 102 ntBASIC2.56□□□□□ -2
CDX4O14627 RPS4XP3-201ENST00000398541 413 ntBASIC2.56□□□□□ -2
CDX4O14627 TXNP7-201ENST00000406296 293 ntBASIC2.56□□□□□ -2
CDX4O14627 HMGN1P14-201ENST00000412459 517 ntBASIC2.56□□□□□ -2
CDX4O14627 AC018630.2-202ENST00000422992 927 ntBASIC2.56□□□□□ -2
CDX4O14627 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.56□□□□□ -2
CDX4O14627 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.56□□□□□ -2
CDX4O14627 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.56□□□□□ -2
CDX4O14627 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.56□□□□□ -2
CDX4O14627 AC093392.2-201ENST00000450682 337 ntBASIC2.56□□□□□ -2
CDX4O14627 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.56□□□□□ -2
CDX4O14627 MTCYBP1-201ENST00000454315 1119 ntBASIC2.56□□□□□ -2
CDX4O14627 SNRPFP4-201ENST00000456366 242 ntBASIC2.56□□□□□ -2
CDX4O14627 AL590639.1-201ENST00000456484 337 ntBASIC2.56□□□□□ -2
CDX4O14627 AC104472.2-201ENST00000469035 601 ntBASIC2.56□□□□□ -2
CDX4O14627 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
CDX4O14627 RPL30P14-201ENST00000482744 348 ntBASIC2.56□□□□□ -2
CDX4O14627 AC006483.1-201ENST00000487308 313 ntBASIC2.56□□□□□ -2
CDX4O14627 MTND2P33-201ENST00000506452 1031 ntBASIC2.56□□□□□ -2
CDX4O14627 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.56□□□□□ -2
CDX4O14627 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.56□□□□□ -2
CDX4O14627 AL355836.1-201ENST00000555951 870 ntBASIC2.56□□□□□ -2
CDX4O14627 OR4H12P-201ENST00000556269 907 ntBASIC2.56□□□□□ -2
CDX4O14627 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.56□□□□□ -2
CDX4O14627 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.56□□□□□ -2
CDX4O14627 NDUFA8P1-201ENST00000605525 367 ntBASIC2.56□□□□□ -2
CDX4O14627 AC090970.3-201ENST00000612566 866 ntBASIC2.56□□□□□ -2
CDX4O14627 AL589743.7-201ENST00000612637 233 ntBASIC2.56□□□□□ -2
CDX4O14627 TUG1_2.1-201ENST00000614234 87 ntBASIC2.56□□□□□ -2
CDX4O14627 MIR6076-201ENST00000617521 113 ntBASIC2.56□□□□□ -2
CDX4O14627 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.56□□□□□ -2
CDX4O14627 AL359740.1-201ENST00000624340 592 ntBASIC2.56□□□□□ -2
CDX4O14627 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.56□□□□□ -2
CDX4O14627 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CDX4O14627 AC092447.7-201ENST00000422212 1621 ntBASIC2.56□□□□□ -2
CDX4O14627 AC027514.1-201ENST00000588561 1603 ntBASIC2.56□□□□□ -2
CDX4O14627 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDX4O14627 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDX4O14627 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.56□□□□□ -2
CDX4O14627 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDX4O14627 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
CDX4O14627 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.55□□□□□ -2
CDX4O14627 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms