Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL138976.2-201ENST00000563989 694 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 RPS3AP23-202ENST00000574601 686 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC012213.3-201ENST00000577199 777 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 MIR5004-201ENST00000579078 107 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC174048.1-201ENST00000603389 144 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC119501.1-201ENST00000603646 475 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL138963.2-201ENST00000605137 226 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC034229.4-201ENST00000607861 441 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL161423.1-201ENST00000613700 262 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 U4atac.1-201ENST00000618345 95 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC138627.2-201ENST00000624202 601 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL161912.2-201ENST00000565707 3007 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 Y_RNA.97-201ENST00000363094 102 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RNU1-112P-201ENST00000364401 164 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 SNORA4.3-201ENST00000365564 137 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RNU6-898P-201ENST00000365627 104 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 SNORA18.3-201ENST00000384122 132 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RNU1-148P-201ENST00000384472 162 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 MIR144-201ENST00000384886 86 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AL138827.1-201ENST00000402666 306 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 FCF1P10-201ENST00000407590 479 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 SNORD23.1-201ENST00000408212 104 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 MIR1302-8-201ENST00000408342 128 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RN7SKP158-201ENST00000410453 326 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RNA5SP120-201ENST00000410900 112 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AL591212.2-201ENST00000433923 257 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC011816.1-201ENST00000441346 546 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RPL7P12-201ENST00000446719 750 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RPS29P26-201ENST00000477483 171 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC116347.2-201ENST00000514912 523 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RN7SKP157-201ENST00000516174 282 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RNA5SP82-201ENST00000516707 92 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RNU6-677P-201ENST00000516914 101 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RNU6-1092P-201ENST00000516955 87 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 SNORA31.19-201ENST00000517079 126 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 MIR5092-201ENST00000583139 88 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 ELOCP35-201ENST00000604289 336 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC121334.2-201ENST00000605387 271 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC068276.1-201ENST00000605793 379 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC022893.3-201ENST00000607665 437 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC103710.2-201ENST00000609912 942 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC009233.1-201ENST00000616477 371 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AP003400.5-201ENST00000624827 617 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 MIR203B-201ENST00000636080 86 ntBASIC1.86□□□□□ -2.11
SMKR1H3BMG3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
SMKR1H3BMG3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC092104.1-201ENST00000497346 1441 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 SNORD113-6-201ENST00000363345 75 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 RNU6-960P-201ENST00000364056 120 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 MIR183-201ENST00000384958 110 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 MIR200C-201ENST00000384980 68 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 MIR518D-201ENST00000385014 87 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 RNU2-63P-201ENST00000410792 194 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AL353621.1-201ENST00000418219 243 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 RPS27AP14-201ENST00000422868 454 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AL512649.1-201ENST00000428997 581 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 RPL7P34-201ENST00000433316 712 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 GDI2P2-201ENST00000445131 608 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 BTF3P15-201ENST00000455606 336 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC093899.1-201ENST00000457984 376 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AL139824.2-201ENST00000458731 1095 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.85□□□□□ -2.11
SMKR1H3BMG3 AC011005.2-201ENST00000487324 359 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 SNORA25.11-201ENST00000515935 105 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 RNU2-10P-201ENST00000516375 211 ntBASIC1.85□□□□□ -2.11
SMKR1H3BMG3 RNU6-914P-201ENST00000516749 109 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms