Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ARL2BPP4-201ENST00000506854 471 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 Y_RNA.689-201ENST00000516589 107 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 RNU6-677P-201ENST00000516914 101 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 RNU6-143P-201ENST00000516942 93 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AC087883.1-201ENST00000551882 391 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 RSL24D1P11-201ENST00000591045 491 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 BNIP3P9-201ENST00000603714 553 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 MIR98-201ENST00000606724 119 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AC098614.4-201ENST00000607601 462 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AC010678.1-201ENST00000614118 713 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 AC090582.1-201ENST00000636321 199 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 MTND5P42-201ENST00000637720 498 ntBASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NPIPA3F8WFD2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 MIR888-201ENST00000401186 77 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AC092809.3-201ENST00000415453 231 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 C1DP2-201ENST00000418167 426 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AL591212.2-201ENST00000433923 257 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 RPL23AP22-201ENST00000437556 453 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 RPL21P2-201ENST00000440049 481 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 RPL26P9-201ENST00000457466 433 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 RPS29P12-201ENST00000460178 152 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AC139453.3-201ENST00000493276 369 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AC105252.1-201ENST00000503089 286 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 SUMO2P6-201ENST00000505273 288 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 SCARNA24.1-201ENST00000516465 137 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 OR5B19P-201ENST00000531766 928 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 NRBF2P1-201ENST00000587407 859 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AC022893.3-201ENST00000607665 437 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AC006566.1-201ENST00000608943 513 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AC110079.1-202ENST00000635213 138 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 AL137003.2-201ENST00000606924 2538 ntBASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPIPA3F8WFD2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 RNU6-348P-201ENST00000384386 107 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 Y_RNA.510-201ENST00000384511 114 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 MIR558-201ENST00000384920 94 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 RNA5SP354-201ENST00000391247 136 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 RNU2-39P-201ENST00000410604 198 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AL645937.1-202ENST00000421799 937 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 HMGN2P30-201ENST00000423237 256 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 RPL23AP30-201ENST00000432419 501 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AC107083.1-201ENST00000439643 279 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 RPS12P18-201ENST00000442381 270 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 KATNBL1P3-201ENST00000443475 909 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 RN7SL283P-201ENST00000489055 303 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 RPS27P26-201ENST00000494583 239 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AC117522.2-201ENST00000510049 657 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 MIR4528-201ENST00000577763 90 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AL158032.1-201ENST00000605401 106 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AC008498.1-201ENST00000613012 531 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 AL512643.1-201ENST00000635735 524 ntBASIC2.73□□□□□ -1.97
NPIPA3F8WFD2 Z99571.1-201ENST00000636677 394 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms