Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AP000907.2-201ENST00000530827 353 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 PRELID2P1-201ENST00000552837 301 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AL133153.1-201ENST00000557756 303 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 MED28P6-201ENST00000558776 231 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 RPL12P50-201ENST00000603116 116 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 DPPA3P3-201ENST00000603842 430 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC064872.1-201ENST00000604823 1072 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC068276.1-201ENST00000605793 379 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC064807.4-201ENST00000607201 407 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC138749.5-201ENST00000611461 208 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC008250.2-201ENST00000615261 205 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC116165.2-201ENST00000616705 206 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AL160394.1-201ENST00000624765 724 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 AC009902.3-201ENST00000606235 2172 ntBASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM49D1C9J1S8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 Y_RNA.201-201ENST00000364052 96 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 RNU6-1078P-201ENST00000364522 103 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 RNU4-24P-201ENST00000364565 139 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 RNY4P34-201ENST00000364779 95 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 OR5H15-201ENST00000383696 930 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AL137014.1-201ENST00000420490 1226 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC004866.2-201ENST00000438285 481 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 MTCYBP1-201ENST00000454315 1119 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC034222.1-201ENST00000494052 532 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 RNU6-1003P-201ENST00000517099 105 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC018630.1-201ENST00000541376 925 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 MIR4319-201ENST00000577285 85 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 MIR4293-201ENST00000584305 78 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AL035413.2-201ENST00000604801 525 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC004067.1-201ENST00000608733 700 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC012360.2-201ENST00000609349 391 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC091304.9-201ENST00000612091 226 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC008498.1-201ENST00000613012 531 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC099842.1-201ENST00000619919 596 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AC007998.5-201ENST00000622938 237 ntBASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM49D1C9J1S8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 RNU6-359P-201ENST00000365466 108 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 RNU6-39P-201ENST00000384344 107 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 SNORA80E-201ENST00000384744 137 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 BX682237.1-201ENST00000415016 335 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 UBE2FP1-201ENST00000416536 447 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC018630.2-202ENST00000422992 927 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 PPP1R11P2-201ENST00000423543 382 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 ISCA1P6-201ENST00000427740 390 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AL358934.1-201ENST00000432346 324 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 RPL22P17-201ENST00000438729 315 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 MTND6P13-201ENST00000443510 523 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC073901.1-201ENST00000462471 408 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 KLF3P2-201ENST00000465138 268 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AL049874.1-201ENST00000489560 388 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 SEM1P1-201ENST00000506694 209 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 NDUFB4P2-201ENST00000509515 391 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC107222.1-201ENST00000510899 637 ntBASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
TRIM49D1C9J1S8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms