Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC010631.1-201ENST00000474150 156 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC026979.1-201ENST00000492525 396 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 RPL22P13-201ENST00000493291 347 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC096745.1-201ENST00000509945 370 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 SCARNA16.2-201ENST00000516520 172 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 IGKV2D-23-201ENST00000518179 286 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC006064.5-201ENST00000541782 248 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC011494.1-201ENST00000596454 237 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AL034351.1-201ENST00000605288 668 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AP002826.1-201ENST00000608835 315 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC064801.1-201ENST00000612025 407 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC107871.2-201ENST00000612894 502 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AC100827.5-201ENST00000615883 426 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 SDAD1P2-201ENST00000441308 2028 ntBASIC3.41□□□□□ -1.86
CGB1A6NKQ9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CGB1A6NKQ9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 AC090740.1-201ENST00000623193 2262 ntBASIC3.4□□□□□ -1.86
CGB1A6NKQ9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.4□□□□□ -1.86
CGB1A6NKQ9 Y_RNA.2-201ENST00000362330 96 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 Y_RNA.380-201ENST00000365663 111 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 RNU6-701P-201ENST00000384059 107 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 RNU6-823P-201ENST00000391042 103 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AL133270.1-201ENST00000402635 279 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 SNORA11F-201ENST00000408237 128 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 MIR1290-201ENST00000408735 78 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AL356968.1-201ENST00000416622 474 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AL356387.2-201ENST00000422272 243 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 RPL23AP50-201ENST00000434149 455 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC099799.1-201ENST00000439809 192 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 RPS24P13-201ENST00000442520 397 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 GAPDHP27-201ENST00000447427 1020 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AL162151.2-201ENST00000448875 158 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 RN7SL610P-201ENST00000463845 291 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC108860.1-201ENST00000484521 383 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC107222.1-201ENST00000510899 637 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC104136.1-201ENST00000512969 394 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 RNA5SP384-201ENST00000516615 116 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 TRAV8-5-201ENST00000537369 341 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 SYF2P1-201ENST00000550658 413 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AL355297.3-201ENST00000604082 446 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AC113403.1-201ENST00000604910 193 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AL161423.1-201ENST00000613700 262 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 AL110115.1-201ENST00000614396 364 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 uc_338.13-201ENST00000618243 179 ntBASIC3.4□□□□□ -1.87
CGB1A6NKQ9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CGB1A6NKQ9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CGB1A6NKQ9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CGB1A6NKQ9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CGB1A6NKQ9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.39□□□□□ -1.87
CGB1A6NKQ9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.39□□□□□ -1.87
CGB1A6NKQ9 Y_RNA.39-201ENST00000362620 98 ntBASIC3.39□□□□□ -1.87
CGB1A6NKQ9 SNORD6-201ENST00000365444 73 ntBASIC3.39□□□□□ -1.87
CGB1A6NKQ9 Y_RNA.424-201ENST00000384063 103 ntBASIC3.39□□□□□ -1.87
CGB1A6NKQ9 RNU6-306P-201ENST00000384617 107 ntBASIC3.39□□□□□ -1.87
CGB1A6NKQ9 SNORA41-201ENST00000384675 132 ntBASIC3.39□□□□□ -1.87
CGB1A6NKQ9 MIR513A2-201ENST00000385249 127 ntBASIC3.39□□□□□ -1.87
CGB1A6NKQ9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms